| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_1937 |
|---|
| Symbol | rpsD |
|---|
| ID | 5377126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 2197493 |
|---|
| End bp | 2198119 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640843446 |
|---|
| Product | 30S ribosomal protein S4 |
|---|
| Protein accession | YP_001379124 |
|---|
| Protein GI | 153004799 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
|---|
| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCGCT ACAACGAAAG CGTCTGCCGG CTCTGCCGCC GGGAGAACCT CAAGATGTAC
CTGAAGGGCG ACCGGTGCTA CACCGACAAG TGCGCCATCG AGCGCCGCCC TTATCCCCCG
GGCCAGCACG GCCAGGGGCG CGTGAAGTTC TCGGAGTACG GCGTCCAGCT CCGTGAGAAG
CAGAAGGTGA AGCGGATGTA CGGCCTCCTC GAGGCCGGCT TCCGCCACGC GTACCAGAAC
GCCGCCGCCG CGAAGGGCAA GACCGGCGAG AACCTGCTGC AGACGCTCGA GCTCCGGCTC
GACAACGTCG TGTTCCGCCT CGGCTTCGCC GACACCCGCA ACGAGGCGCG GCAGCTCGTC
CGCCACGGCC ACTTCAAGGT GAACGGCCGC AAGGTCAACA TCCCGAGCTA CCTCTGCCGC
GCGGGCGACA AGGTCGAGCT GCGGGATCGC TCGAGGAAGG TCGTCCGCAT CAGCGAGGCG
CTCGAGGCGG TGGACCGCCG CGGCGTCCCG GGCTGGCTCG AGCTGGACAA GGGCGGCTTC
AAGGGCACGG TGAGGACCCA GCCTTCGCGC GAGGACATCA CCATGCCGAT CCAGGAGCAG
CTCATCGTCG AGCTGTACTC GAAGTAA
|
|---|
| Protein sequence | MARYNESVCR LCRRENLKMY LKGDRCYTDK CAIERRPYPP GQHGQGRVKF SEYGVQLREK
QKVKRMYGLL EAGFRHAYQN AAAAKGKTGE NLLQTLELRL DNVVFRLGFA DTRNEARQLV
RHGHFKVNGR KVNIPSYLCR AGDKVELRDR SRKVVRISEA LEAVDRRGVP GWLELDKGGF
KGTVRTQPSR EDITMPIQEQ LIVELYSK
|
|---|
| |