Gene Anae109_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1926 
SymbolrplF 
ID5378163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2191016 
End bp2191558 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID640843435 
Product50S ribosomal protein L6 
Protein accessionYP_001379113 
Protein GI153004788 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.459918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCA TCGGCAAGCT GCCCGTGAAG ATCCCGGAGA AGGTGAAGGT CTCCGTGGAC 
GGCAACCTCG TGAAGGTCGA GGGGCCCAAG GGCAAGATGT CCTTCCCCAC GAATCCGCGC
GTGAAGGTCG CGGTGGACAA GGGCGAGGTG CAGGTCACGC GCCCCGACGA CTCCCCCGAG
TCGAAGGGCT TGCACGGCCT CACCCGCACG CTGGTCAAGA ACGCGCTCGA CGGCGTCGTG
AAGGGCTACG AGCGTGGCCT CGAGATCAAC GGCGTCGGCT TCAAGGCCGA GGTGAAGGGG
AAGGAGATCC ACTTCGCCCT CGGCTTCTCC CACCCGGTGG TGTTCAAGCT GCCGGAGGGC
GTGACCGCCG AGGTCGACGC GAAGCAGACG AAGCTCACGG TGAAGGGCGT GGACAAGCAC
GTCCTCGGCC TCACCGCCGC GAAGATCCGC GCGCTGCGCC CCCCCGAGCC GTACAAGGGC
AAGGGCATCA AGTACGCGGA GGAGATCATC CGCCGCAAGG AAGGCAAGAC CGGCGCCGCC
TAG
 
Protein sequence
MSRIGKLPVK IPEKVKVSVD GNLVKVEGPK GKMSFPTNPR VKVAVDKGEV QVTRPDDSPE 
SKGLHGLTRT LVKNALDGVV KGYERGLEIN GVGFKAEVKG KEIHFALGFS HPVVFKLPEG
VTAEVDAKQT KLTVKGVDKH VLGLTAAKIR ALRPPEPYKG KGIKYAEEII RRKEGKTGAA