| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_1897 |
|---|
| Symbol | |
|---|
| ID | 5374903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 2170993 |
|---|
| End bp | 2171799 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640843406 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001379084 |
|---|
| Protein GI | 153004759 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.0935119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGC CTCGCCCGCC CGACGCCCCC CTCCCCTCGT CCCGGCCCTT CGCTCTCCGT
CTCCCTCTCG TACTCGTCCT CGGCTGCGCC GCCGCGTGCG CCGGGCGCGC CGCCGTGCAC
CCGCGCGCGG CGGAGGAGGT CCGGCGCGGC TACGCGTACC TGGAGGCGGC CGACCCGGAG
CGCGCGACCG TCGCCTTCTC GCACGCGCTG GAGTTCGATC CCGACTTCCC GGAGGCGCTG
AACGGCCTCG GGATCGTCGC TCGCCGCGAG GGAGACCTCG ACACCGCGCG GCGGCGGTTC
GAGCGGGCGG TGCGGCTCGC GCCCGACTTC GCCGAGGGGC ACGCGAACCT GGGAGAGACG
CTGCTCGCGG CGGGGCGCGA GGGTGGCGGC ACCGACGCGC TCCGCGCCGC GTTGCGCATC
GATCCCGACC TCGCCGACGC CCGCCAGAAC CTCGCCCGCG CCCTCCTCCG CCACGGCCTG
GACTCGCCCG ATCGCGGCGC GCGCTGGGCC GAGGCCCGCC GCGAGTACCT GCACCTGCTC
GAGGCGGCGC CCGATCGCGC CGCGGCGCAC CACGACCTCG CCTTCATGGA CTACGTGGAG
GGGCGCTTCG AACGGGCGGA GGCGGGCTAC CGGCGCGCCG CGGAGCTGGA GCCCGGCTCG
CACGAGGCGC TGCACGGGCT CTGCGTCTCG CTCGTGCGGC TCGCGCGATG CGACGAGGCG
GTCCGGGCGT GCGAGCGTTG CCTGGAGGTG TCGCCCGGCG CGGACGCCTG CCGGACGAGC
CTGCGCGGCG CCCGCGCCTG CGAGTGA
|
|---|
| Protein sequence | MPAPRPPDAP LPSSRPFALR LPLVLVLGCA AACAGRAAVH PRAAEEVRRG YAYLEAADPE
RATVAFSHAL EFDPDFPEAL NGLGIVARRE GDLDTARRRF ERAVRLAPDF AEGHANLGET
LLAAGREGGG TDALRAALRI DPDLADARQN LARALLRHGL DSPDRGARWA EARREYLHLL
EAAPDRAAAH HDLAFMDYVE GRFERAEAGY RRAAELEPGS HEALHGLCVS LVRLARCDEA
VRACERCLEV SPGADACRTS LRGARACE
|
|---|
| |