Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_1889 |
Symbol | |
ID | 5377648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 2162457 |
End bp | 2163131 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640843398 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001379076 |
Protein GI | 153004751 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.650904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.189896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCTC GCACCGCCAT CGTGACCGGC GGGGGGCGCG GGATCGGCGC CGCGATCGCG CGCGCGCTCA CCGCCCGCGG CGTCGCGGTG ACGGTGTTCG CGCGGACCGC GGCCGAGCTG GAGCGGGTCG TCGCCGGCGG TGGGGCCGCG CTCGCGGTGG CGGGGGACGT CTCCCGCGAG GCCGACGTGG GGCGCCTGGT CGAGGCCCAC GAGCGCGCCC TCGGCCCGGC GGATCTGCTC GTGAACAACG CCGGCGTGCT GGCGCGCGGA CTCGCCGAGG AGCTCTCGCC CGCCGCGTTC CGCGCGGTGC TCGAGGTGAA CCTCACCGGC GCGTTCCTCT GCGCGCGCGC CGTGATCCCA GGCATGAAGG CGCGCCGGCG CGGGCGCATC GTGAACGTCG CGTCGATCTC CGGGACGATC GGCACGGAGG CGGCGAGCGC CTACAACGCC TCGAAGTGGG GGCTCATCGG GCTCACCAAG TGCCTCGCCG AGGAGCTCCG GCCGCACGCG GTGCAGTGCG TGGCGGTGTC GCCCGGCAGC ACCGACACGG ACCTGCTGAG GGCCACGCCC TTCGCGCCCG CCATGACGCC CGAGGACGTC GCGCGGGTGG TGGTGTTCGC GGCCCTCGAC GCGCCCGCCG CCATCACCGC GGCGAACCTG GAGGTCTACG GATGA
|
Protein sequence | MSARTAIVTG GGRGIGAAIA RALTARGVAV TVFARTAAEL ERVVAGGGAA LAVAGDVSRE ADVGRLVEAH ERALGPADLL VNNAGVLARG LAEELSPAAF RAVLEVNLTG AFLCARAVIP GMKARRRGRI VNVASISGTI GTEAASAYNA SKWGLIGLTK CLAEELRPHA VQCVAVSPGS TDTDLLRATP FAPAMTPEDV ARVVVFAALD APAAITAANL EVYG
|
| |