Gene Anae109_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1880 
SymbolinfC 
ID5373892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2155083 
End bp2155772 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content70% 
IMG OID640843389 
Producttranslation initiation factor IF-3 
Protein accessionYP_001379067 
Protein GI153004742 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.10659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCC AGCAGCGAGA CAGCCGAGGC GGAACGAACC GGGACGCGCG CACCAACCGC 
CGCATCAAGG CGCGCGAGGT CCGTGCGATC GGGCCCGAGG GCGAGCAGCT CGGCGTGCTC
CCGATCGAGC AGGCGCTGGC GCGTGCGCAG GAGCTTGGGA TGGACCTCGT CGAGGTCAGC
CCCATGGCCA AGCCGCCAGT CTGCAAGATC ATGGACTACG GCAAGTTCAA GTACCTCGAG
AAGAAGAAGC AGAACGAGGC CAAGAAGAAG CAGGTCGTCG TCCAGCTGAA GGAAGTGAAG
CTGCGCCCGC GCACCGAGGA GCACGACTAC GCGACCAAGA TCAAGAAGGT CCGCGAGTTC
CTCGGCGAGT CGAACAAGGC CCGCATCACG GTGACCTTCC GCGGCCGCGA GATGTCGCAT
CGCGAGCTCG GGCAGAAGGT GCTGCAGCGG ATCATCGAGG ATCTGCGCGA GGTGGCGGTG
ATCGAGGCGG CGCCCCGCAT GGAAGGGCGC CAGATGTTCA TGATCCTCGC GCCGAACCCG
AGGATGCTCC AGGCCCAGCG CGACCGCGCC AAGGCGGCGG CCCAGGCCGC CCCGGCGGCC
GCGCCCCAGC CCGGGGCTCC GGCCGCGCCG CCCGCCGCGC CGGCGCCTGC GCCGGCGCCC
GAGCAGACCC CGGAGGCCGG GCCGCGGTAG
 
Protein sequence
MAIQQRDSRG GTNRDARTNR RIKAREVRAI GPEGEQLGVL PIEQALARAQ ELGMDLVEVS 
PMAKPPVCKI MDYGKFKYLE KKKQNEAKKK QVVVQLKEVK LRPRTEEHDY ATKIKKVREF
LGESNKARIT VTFRGREMSH RELGQKVLQR IIEDLREVAV IEAAPRMEGR QMFMILAPNP
RMLQAQRDRA KAAAQAAPAA APQPGAPAAP PAAPAPAPAP EQTPEAGPR