Gene Anae109_1851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1851 
SymbolrplC 
ID5376863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2108895 
End bp2109605 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content68% 
IMG OID640843359 
Product50S ribosomal protein L3 
Protein accessionYP_001379038 
Protein GI153004713 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.722115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTG GGCTTCTCGC GAAGAAGCTG GGCATGACGC AGATCTTCAC CGCCGAGGGC 
GACTGCATCC CGGTGACGGT GCTCGAGGCG GGCCCCTGCA CGGTGGTGCG CCGCAAGACG
GCGGAGAAGG ACGGCTACGA CGCCGTCGTG ATCGGCTGGG GCGAGGTGGA CGAGAAGCAC
GCCCACCGGC TCACGAAGCC CGAGGTCGGG GTCTTCAAGA AGGCCGGCAC CCCGGTCTTC
CGGCACGTGA AGGAGATCCG CGTCAAGGAC GCGAAGCTCC TCGGCGAGCT CAAGGCGGGC
GACGTCCTCA CCGTCGACAA GGTCTTCAAG CAGGACCAGC GCATCGACGT GGCCGGCGTG
ACGAAGGGCC GCGGGTTCAC CGGCGTCATG AAGCGCTGGA ACATGCACGG CGCCGCGCGC
GACTCGTCGA CGACGCACGA GCACCACCGC CACGTCGGCG CGATCGGTCA GCGCAAGACG
CCCGGCAAGG TGTGGAAGGG CAAGCACCTC CCCGGCCACT ACGGCGTCGA CAACGTCACC
ATCCAGAACC TCACCATCGT CGGCGTGGAG GCGGACAAGA ACCTCCTCCT CGTGAAGGGC
GCGGTCCCGG GCCACAACGA CGGGCTCCTC TTCGTGAACA CGGCCGTGAA GGGCCAGCCG
CGCGTGAAGA AGGTGCAGGA GGTCCGCGCG CGCGCCAAGC CGAAGGTCTA G
 
Protein sequence
MATGLLAKKL GMTQIFTAEG DCIPVTVLEA GPCTVVRRKT AEKDGYDAVV IGWGEVDEKH 
AHRLTKPEVG VFKKAGTPVF RHVKEIRVKD AKLLGELKAG DVLTVDKVFK QDQRIDVAGV
TKGRGFTGVM KRWNMHGAAR DSSTTHEHHR HVGAIGQRKT PGKVWKGKHL PGHYGVDNVT
IQNLTIVGVE ADKNLLLVKG AVPGHNDGLL FVNTAVKGQP RVKKVQEVRA RAKPKV