Gene Anae109_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1789 
Symbol 
ID5375275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2022495 
End bp2023976 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content79% 
IMG OID640843297 
Productouter membrane efflux protein 
Protein accessionYP_001378976 
Protein GI153004651 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCTC CCCTGCCCTC CGGTGGCCCC GCCCGCCGTC TCCTCGGCGC AGCGGCCGCT 
CTCCCGCTCC TGGCGGCGTG CGGCACGCTC TCCCCGTCGC GCTACGTCGC AGATCGCACC
GCACCGCCGC CGGACGTCGC GCGCGTCGCG AGGGCTGAGG GCGCGGCGCC CGTCGCGCCT
CCTCCTTCGG CCCCGGCGCC CGCGGCGGCG GAGCCCCGCT CGCTCGCGGA TCTCGTGGAC
CTGGCGCTCT CACGCGACCC GGCGACCCGG GCCGCGTGGC ACGACGCGCG CGCCGCCGCC
GCCCAGGCGG GCGCCCAGCG CGGCCTCTAC TGGCCCGCCC TGGACGCGTC CGCGACGCTG
CAGCGTCAGG GCTCCACCGG CGGTCGCAGC CGAGACGCGT TCACCAGCAC GACCGGCGGC
GCCGCCGCGA CGCTGACCTG GCTCCTCCTC GACCTCGGCC CGCGCGGCGC GCTGGTGGAC
TCCGCCGACT TGTTGCTCGT CGCGGCGCGG CTCGCCGAGC ACGCAGCGGT CGCCGACCTC
GTCCTGCAGG TGCAGCAGAC GTACTTCCAG TACCTCGCCG CCAGGGCGCT CGCGGAGGCC
GAGCTCGCGG CCGTGCGTCA GGCCGAGACC AGCCTCGCCA CCGCGGAGGG GCGGCGCGAC
GCGGGGGTCG CGACCATCGC AGACGTGCTG CAGGCGCGCA CGGCGCTCTC CCAGGTCCGG
CTCACGCTGC AGCAGGCGGA GGGGCAGGCC CTCGCCCTGC GCGGAGCGCT CGCGACGCTC
GCCGGTCTTC CACCGACCGC CGAGCTGGAG GTCGGCGCGC TCCCCGCCGA GGTGGACGCG
GCGAAGGCCG GCCCCGAGGT GGACGCGCTC CTCGCCGAGG CGGCGGTCCG CAACCCGGAC
CTCGGCCGCG CCCGGGCGCT GGCCAGCGCC GCCGACGCGC GGGCACGCGC CGCGTCGCGC
GCCTCGTGGC CGACGCTCTC GTTCCAGGCG CTCGGCGGGC GCACCCGGTA CTTCGCGCCC
GAGGACACGG ATCCGTCGAC CACCTGGTCC GCCGGGCTCG TGCTGCGCGT GCCGATCTTC
GAGGGGCTCG CGCCGGCCTA CGCCGCGCTG GCCGCGCGCG CCGACGCGGA CGCGGCCCGC
GCGCGCGCCG ACGCCGCCGG CCAGCGCGTC GCCCTCGACG TCTGGACCAG CTACCAGGGG
CTCCTCACCG CCGGCCGGCG GCTCGAGACC GCCCGCGATC TGCTGGCGTC GGCGCGCGCT
TCCGCGGACG TGGCCCGCGG ACGTTACCGG GAGGGAGTCG GCTCGATCCT CGATCTCCTG
AGCGCGCAGG CCGCGCTCGA GACCGCCCAG GCAGAGGACG TGCGCGCCCG CTCCGATTAC
CTCATCTCCC TCGCCCTGCT CACGCGGGCG AGCGGCCGGC TGGATCTCGC CGTGACGGCG
CCCCGGGGCG CGTCCGAGGC GCCGGCCGAA GGAACGCCAT GA
 
Protein sequence
MLSPLPSGGP ARRLLGAAAA LPLLAACGTL SPSRYVADRT APPPDVARVA RAEGAAPVAP 
PPSAPAPAAA EPRSLADLVD LALSRDPATR AAWHDARAAA AQAGAQRGLY WPALDASATL
QRQGSTGGRS RDAFTSTTGG AAATLTWLLL DLGPRGALVD SADLLLVAAR LAEHAAVADL
VLQVQQTYFQ YLAARALAEA ELAAVRQAET SLATAEGRRD AGVATIADVL QARTALSQVR
LTLQQAEGQA LALRGALATL AGLPPTAELE VGALPAEVDA AKAGPEVDAL LAEAAVRNPD
LGRARALASA ADARARAASR ASWPTLSFQA LGGRTRYFAP EDTDPSTTWS AGLVLRVPIF
EGLAPAYAAL AARADADAAR ARADAAGQRV ALDVWTSYQG LLTAGRRLET ARDLLASARA
SADVARGRYR EGVGSILDLL SAQAALETAQ AEDVRARSDY LISLALLTRA SGRLDLAVTA
PRGASEAPAE GTP