Gene Anae109_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1787 
Symbol 
ID5376090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2018216 
End bp2021350 
Gene Length3135 bp 
Protein Length1044 aa 
Translation table11 
GC content71% 
IMG OID640843295 
Productacriflavin resistance protein 
Protein accessionYP_001378974 
Protein GI153004649 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.342493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCT CCGCCCCTTT CATCCGCCGG CCCGTCATGA CGACGCTCGT CATGGCGAGC 
TTCACGGCGT TCGGCGTCTT CGCCTACCGC TCGCTGCCGG TCTCGGACCT GCCGGTGGTG
GACTTCCCCA CCATCTCGGT GAACGCCTCG GTCCCCGGCG CGAGCCCGGA GACGATGGCC
GCCTCGGTCG CGACGCCGCT CGAGCGCGAG TTCTCGAACA TCGCCGGCAT CAAGAGCATG
AACTCGTCGT CGAGCCAGGG CTCGACCTCG GTCACGCTCG AGTTCGATCT CGACCGCGAC
ATCGACTCGG CGGCGCTCGA CGTGCAGGCG GCGATCTCGG CCAGCCTCGG CAAGCTCCCG
TCGACGATGC CCAACCCGCC GACGTTCCGG AAGGTGAACC CGGCGGACCA GCCCATCCTC
TACCTCTCGC TCACCTCTCC CACGCTGCCG CTCTCGAGCG TGAACCGCTA CGCGCAGGAT
CTCGTCGCGC AGCGCATCGC GACGGTGCCG GGCGTGGCGG AGGTCGCCAT CTTCGGATCC
CAGAAGTACG CGGTGCGGAT CCAGCTCGAC CCGCGCGCGC TCGCGGCCCG CGGCATCGGG
CTCGAGGAGG TGGCGGCCGC GGTCCGCAGC TCCAACGCGA ACCTGCCCAC CGGCATCATC
GAGGGGCGCG ATCGCGCCTA CACCATCGAG GCGTCCGGCG GCCTGCTCAC CGCGGCCGAC
TTCCGCGAGG TGGTGGTGGC GTTCCGCGAC GGCGCGCCCG TGCGGCTCGC CGACCTCGGC
GAGGTGAAGG ACGGCGTGGA GAACGACCGC GTCGCCGCCT GGTTCGTCCA GGCCGGCAAG
GACCAGCGGA GCGTCACGGT GGCGGTGCGG CGGCAGCCGG GCACGAACAC CGTCCAGATC
GCGGAGGAGG TGCAGCAGCT GCTCCCCACG ATCAACCAGC AGCTCCCCGC GGCCGTCGAG
CTGAAGGTGA TCTACGACCG CTCCGAGTCG ATCCGCCACT CGGTCGTGGA CGTGCAGTTC
ACGCTGCTCC TCACGCTCGC CCTGGTGGTC CTCGTCATCT TCCTGTTCCT GCGGAACCTG
CCCGCGACGG TCATCCCGAG CCTCGCCCTG CCCGTGTCCC TCGTCGGCAC CTTCGGGCTC
ATGGCCGCGC TGGACTACTC CCTCGACAAC CTCTCCCTCA TGGCGCTGAC GCTCGCCGTC
GGGTTCGTGG TCGACGACGC CATCGTCATG CTCGAGAACA TCGTCCGGCA CATGGAGCGC
GGCGAGCCGC CGCTCGAGGC GGCGTTCCGC GGGTCGAAGG AGATCGCCTT CACCATCGTC
TCGATGACGA TCTCGCTCGC CGCGGTCTTC CTCCCCATCC TCTTCATGGG CGGGCTCGTG
GGGCGGCTCT TCGAGGAGTT CGCGGTCACC ATCGGCGCCG CCATCCTGGT CTCCGGCTTC
GTCTCCCTCA CCCTCACCCC CCTCCTCTGC GCGCGCTTCC TGAAGCCCCA CGCCCGGGAG
CGGCACGGCC GCTTCTACCT GGCCACGGAG CGCGCCTTCG ACGCGTCTCT GCGCTTCTAC
GATCGCGGCC TCACCTGGTC GCTCGCGCAC CCGCGCGCGG TGCTCGCGTT CTCCGCGCTC
GTGCTGGTGC TCATGGTCCC GCTCTGGAGG GCCGTGCCGA AGGGCTTCCT CCCGAGCGAG
GACACCGGCC GGCTCCTCAT CAACACGGAG CCGGCGGAGG GCACGAGCTG GGACGCGATG
GTCCGGGCCC ACCGGAACGT CGCCGAGATC GCCACCCGTC ACCCGGCCGT GGACCACGCG
AACTCGACCG TCCGCAGCTC CTCGAACGGC TTCGTGTTCC TCCGGCTGAA CGACGGCGAC
CGGCCGCACG TGGATCAGGT CATCCAGGAT CTCCGCCGCG AGCTGGGGGC CGTCCCGTCG
GTGCGCGCGA TCCCGATCAA CCCGCCGCCC ATCTCGCTCG CGGGCGGCGG CGGGCGAGCC
CAGTACTCGG TCACGCTCCA GGACGCCGAC ACCGAGGCGC TCTACCGATC GGCGCCGCAG
CTGGAGGCGC GCATGCGCGG CCTCCCTTCG CTCACCGACG TGAACTCCGA CCTCAGGCTC
GCCTCCCCGC GCGTGACGGT CCAGATCGAC CGCGACCGCG CCGCCGCGCT CGGCGTCTCG
CCGCTCGCCA TCGAGGACGC CCTCTACACC GCCTTCGGCT CCCGGCGCGT GTCCGTCATC
AGCGCCCCCG AGGACCAGTA CGAGGTGCTG ATGGAGCTCG AGCCGGGGTT CCGGCTCGAC
CCCGGCGCGC TCTCCCTCGT GTACGTCCGG TCCGGCGCGG GCGTGAACCT CGGCTCCGGC
GCGACGGGGA ACCTCGTCCC GCTCGACACC CTCGCCAAGC TGGGCCGCAC GGTCGGCCCG
CTGTCGGTGA ACCACGCCGG GCAGCTCCCC GCCGTGAACC TCAGCTTCAA CCTCGCCCCC
GGACGATCGC TCGGCGACGC GGTGCAGGAG ATCGAGGCAG CCGCCGCGGA GGAGCTGCCC
GCCACGGTGG GTACGCGCTT CCAGGGCACG GCCCAGGCCT TCCAGGAGTC CATGCGCGGC
CTCGGGGTGC TCCTCGTCAT GGCGATCCTG GTCATCTACG TGGTGCTCGG GATCCTGTAC
GAGAGCTTCA TCCACCCGAT CACGATCCTC ACCGCCCTGC CCTTCGCCGG GTTCGGGGCG
CTCGTGACGC TCCTCCTGTT CGGCACCGAC CTGTCCATCT ACGCGTTCGT CGGCATCATC
ATGCTCGTCG GGCTCGTGAA GAAGAACGGC ATCATGATGG TCGACTTCGC CATCGAGGCG
CAGCGCGCGG GCAAGTCGCC GCGCGACGCG ATCCACGAGG CGTCGCTCGT GCGGTTCCGC
CCGATCATGA TGACCACCAT GGCGGCGCTC ATGGGCACGC TGCCCATCGC CCTGGGGATC
GGCGCGGGCG CCGAGTCGCG GCAGCCGCTC GGCCTCGCCG TGGTGGGCGG CCTCCTCTTC
TCCCAGTTCC TCACGCTCTA CGTGACGCCG GTGTTCTACG TGTGGATGGA GCGGCTCCGC
GCAGCCAGCG GCCGCCGGGG CGCCGCGACC GGCGGCGTCG GCCCGGACCG CTCCGCCGCA
GCGCCTCATC CCTAG
 
Protein sequence
MNLSAPFIRR PVMTTLVMAS FTAFGVFAYR SLPVSDLPVV DFPTISVNAS VPGASPETMA 
ASVATPLERE FSNIAGIKSM NSSSSQGSTS VTLEFDLDRD IDSAALDVQA AISASLGKLP
STMPNPPTFR KVNPADQPIL YLSLTSPTLP LSSVNRYAQD LVAQRIATVP GVAEVAIFGS
QKYAVRIQLD PRALAARGIG LEEVAAAVRS SNANLPTGII EGRDRAYTIE ASGGLLTAAD
FREVVVAFRD GAPVRLADLG EVKDGVENDR VAAWFVQAGK DQRSVTVAVR RQPGTNTVQI
AEEVQQLLPT INQQLPAAVE LKVIYDRSES IRHSVVDVQF TLLLTLALVV LVIFLFLRNL
PATVIPSLAL PVSLVGTFGL MAALDYSLDN LSLMALTLAV GFVVDDAIVM LENIVRHMER
GEPPLEAAFR GSKEIAFTIV SMTISLAAVF LPILFMGGLV GRLFEEFAVT IGAAILVSGF
VSLTLTPLLC ARFLKPHARE RHGRFYLATE RAFDASLRFY DRGLTWSLAH PRAVLAFSAL
VLVLMVPLWR AVPKGFLPSE DTGRLLINTE PAEGTSWDAM VRAHRNVAEI ATRHPAVDHA
NSTVRSSSNG FVFLRLNDGD RPHVDQVIQD LRRELGAVPS VRAIPINPPP ISLAGGGGRA
QYSVTLQDAD TEALYRSAPQ LEARMRGLPS LTDVNSDLRL ASPRVTVQID RDRAAALGVS
PLAIEDALYT AFGSRRVSVI SAPEDQYEVL MELEPGFRLD PGALSLVYVR SGAGVNLGSG
ATGNLVPLDT LAKLGRTVGP LSVNHAGQLP AVNLSFNLAP GRSLGDAVQE IEAAAAEELP
ATVGTRFQGT AQAFQESMRG LGVLLVMAIL VIYVVLGILY ESFIHPITIL TALPFAGFGA
LVTLLLFGTD LSIYAFVGII MLVGLVKKNG IMMVDFAIEA QRAGKSPRDA IHEASLVRFR
PIMMTTMAAL MGTLPIALGI GAGAESRQPL GLAVVGGLLF SQFLTLYVTP VFYVWMERLR
AASGRRGAAT GGVGPDRSAA APHP