Gene Anae109_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1772 
Symbol 
ID5374129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1997069 
End bp1997758 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content76% 
IMG OID640843280 
ProductABC transporter related 
Protein accessionYP_001378959 
Protein GI153004634 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.269582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.279268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGGT CGATGGACGC CGTCGTCACC TTTCGTCAAG TCGGTCGGGA CTACCGGACC 
GCCGGCGGCG CCGTGCTGCG CGCGCTCCGC GAGGTGTCGG GCGAGGTGCC CCCGGGGCGG
ATCGTCGCGA TCACGGGCCG GAGCGGCTCC GGCAAGTCCA CGCTCCTGCA CCTCGCCGCC
GGCATCGACG CGCCCACCTC GGGCGAGGTG TTCCTCCTCG GCCGCTCGCT CGCGGCGCTG
CCCGACCGGG AGCGCACGCG GCTCCGGCGC GATCACGTCG GGCTGGTGTT CCAGTTCTTC
CACCTCCTGC CGCACCTCTC GGTCGAGGAG AACGTGCTCG TGCCTGCGCT GGTGGCGGGG
GATCCCCTCC CGGTCGCCGC CGCGCGCGCG CGCGAGCTCC TCGCGCGCGT GGGGCTGGCC
GGCCGCGCGC GGGACGCCGT CCAGAAGCTC TCCGGCGGCG AGATGCAGCG CGTCGCGCTG
TGCCGGGCGC TGCTGCGCCG CCCGCGGCTC CTGCTCGCCG ACGAGCCGAC CGGGAACCTC
GACGAGGAGA GCGGCGAGGC GGTCATGGAT CTCCTGCTCG GGCTCGCGCG CGGCGAGGGC
AGCGCGGTGC TCTTCGTGAC GCACAGCCGC GAGCTGGCCG CCCGCGCCGA CGAGGCGTGG
ACGCTCCACT CCGGCGTGCG GGAGCCCTGA
 
Protein sequence
MGGSMDAVVT FRQVGRDYRT AGGAVLRALR EVSGEVPPGR IVAITGRSGS GKSTLLHLAA 
GIDAPTSGEV FLLGRSLAAL PDRERTRLRR DHVGLVFQFF HLLPHLSVEE NVLVPALVAG
DPLPVAAARA RELLARVGLA GRARDAVQKL SGGEMQRVAL CRALLRRPRL LLADEPTGNL
DEESGEAVMD LLLGLARGEG SAVLFVTHSR ELAARADEAW TLHSGVREP