Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_1730 |
Symbol | |
ID | 5374932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 1948511 |
End bp | 1949203 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 640843238 |
Product | hypothetical protein |
Protein accession | YP_001378917 |
Protein GI | 153004592 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.399565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCCCT GGCAGACGGT GGACCGCGCT CGCGCCCCCG ACGGCGCCGA GCTCGTGCTC GCGCGCCGGG GTGAGGAGTG GGCCGTCCGC GCCGCGGGCC GGGTGCTCAT GACGAGCCGG GCCCACGGCT CCGAGGAGGC GCTCGCGGCG GAGGCGCTCG GGCGCGTCGC CGCGCCCCGC GACGTGCTCG TCGGCGGGCT CGGCCTGGGG TTCACGCTGC GCGCCGCGCT CGATCGGCTG CCGCGCGGTG CGCGCGTGGT CGTCGCCGAG CTGGTCCCTG CGCTCGTCGC CTGGAACCGC GGCCTCATCG GGCACCTCGC CGGCCGCCCC CTCGACGACC CGCGCGTGCA GGTCGCTGAG GGTGACGTCC TCGGACGCCT CGCCGCCGAC GCGGCCTGGG ACGCGATCCT GCTCGACGTC GACAACGGCC CCGCCGCGCT GGCCCACCCC GCGAACGACC GGCTCTACGG CGAGGCGGGG GTCCGCGCCT GTCACCGGGC GCTGCGGCCA GGCGGCGCGC TCGCGGTCTG GTCGGCGGGG CAGGACCCGC GCTACCTCGC CCGGCTGGAG CGGGCCGGCT TCGCCGCGGA GGCGGTCGTG GCGCCCGCGC GCGGGCCTTC GGGCGGCATG CGCCACGCCG TCTTCGTGGG CGTGCGCGGC GCGGCGAGCG GGTCCGGCGC CGGCCGCCGG TGA
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Protein sequence | MIPWQTVDRA RAPDGAELVL ARRGEEWAVR AAGRVLMTSR AHGSEEALAA EALGRVAAPR DVLVGGLGLG FTLRAALDRL PRGARVVVAE LVPALVAWNR GLIGHLAGRP LDDPRVQVAE GDVLGRLAAD AAWDAILLDV DNGPAALAHP ANDRLYGEAG VRACHRALRP GGALAVWSAG QDPRYLARLE RAGFAAEAVV APARGPSGGM RHAVFVGVRG AASGSGAGRR
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