Gene Anae109_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1618 
Symbol 
ID5376187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1818984 
End bp1819793 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID640843127 
ProductABC-2 type transporter 
Protein accessionYP_001378806 
Protein GI153004481 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.794446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTGC GGGCGAGGCG CGTGCTCGCG GTGGTGCTCC GCCAGGCCTA CCTGGTGCGC 
GGGAGCCTCT CGCGCATCGT GCCGCTCTTC GCGTGGGTGG CGGTGGACAT CGTCCTGTGG
GGGTTCATCA CGCGCTGGCT CGACAGCGTC GCGGCGCCCG GGTTCAGCTT CGTCCCGGCG
CTGCTCGGCG CCGTGCTCCT GTGGGACTTC CTCGCCCGCG TCATGCAGGG CGTGACCATG
GCGTTCTTCG AGGACGTCTG GTCCCGCAAC TTCCTGAACG TCTTCGCGAC CCCCATCACG
ATCGGCGAGT ACGTCGCCGG GCTCGTGCTC TCCAGCGTGG CGACGAGCGC GCTCGGCCTC
GCCGTCATGC TCGTCATCGC GACGGGCGTG TTCGGGCTGT CGTTCCTCGC GTACGGCGCG
CCGCTCGTGC CGTTCCTGCT CGTGCTGTTC CTGTTCGGCA TCGCCCTCGG CATCACCGGC
GCCGCGCTGG TGCTCCGGCT CGGCCCGGCC GCGGAGTGGT TCGTCTGGCC GATCCCGGCG
CTGCTGTCGC CGTTCGCGGG CGTGTTCTAC CCGCTCTCGA CGCTCCCCGG GTGGATGCGC
GCCGTGTCCT GGACGCTGCC GCCCTCGTAC GTGTTCGAGG CGATGCGGGC GATGGTCGGC
GGCGGGTCCT TCTCCGGCGC CGCGCTCGCC TGGAGCGGCG CGCTCGCGGT GTTCTACGTC
GTCGTCGCGA GCTGGATCTT CTCGCGCGTC CACCGCCACG CGGTGAGGAC CGGGCTCATA
GCCCGCTACA GCGCCGAGAC CGTGAGCTGA
 
Protein sequence
MMVRARRVLA VVLRQAYLVR GSLSRIVPLF AWVAVDIVLW GFITRWLDSV AAPGFSFVPA 
LLGAVLLWDF LARVMQGVTM AFFEDVWSRN FLNVFATPIT IGEYVAGLVL SSVATSALGL
AVMLVIATGV FGLSFLAYGA PLVPFLLVLF LFGIALGITG AALVLRLGPA AEWFVWPIPA
LLSPFAGVFY PLSTLPGWMR AVSWTLPPSY VFEAMRAMVG GGSFSGAALA WSGALAVFYV
VVASWIFSRV HRHAVRTGLI ARYSAETVS