Gene Anae109_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1498 
Symbol 
ID5378369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1698533 
End bp1701745 
Gene Length3213 bp 
Protein Length1070 aa 
Translation table11 
GC content76% 
IMG OID640843009 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_001378689 
Protein GI153004364 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.308131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.537019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGACC TCGGCGTCCC GGCCGCCATC GTCGGCGCGT ACTTGGCCGC CCTCTTCGGC 
GTCGCGGCGT GGGCGGAGCG GCCCGCCGGC CGCAGGCTGG CGGCCACGCC GCTCGTCTAC
GCGCTCTCCA TGGGCGTGTA CGCGACCACG TGGACGTTCT ACGGCAGCGT CGGCTTCGCC
GCCGAGAACG GGGTCCTCTT CCTCACCGTG TACCTCGGCC CCACGCTCTG CGCGATCGCG
TGGTGGTGGA CGGTCCGCAA GCTCATCCGG ATCAAGGCGG AGTACCGCGT GACCGGGCTG
CCCGATCTCC TCGCCCTGCG CTACGAGCGA TCGCACCGGG TGTCACTGCT CGCCACCGGC
CTGCTCGTGG TCGGGCTCGT GCCCTACCTC GCGCTCCAGC TGAAGACGCT GTCGGCGACG
CTCGGCCTCG TGGCGGGCGG GACCGGTGCG CTCGCGTACC CGCGGGTCGG AGATCGCGTC
GGCCCGCCGC TGGTCGCCTT GCTCGTGCTG TTCACGGTGC TGTTCGGGCT GAGGCGGGTC
CGCCCGACGG AGCGCCACCC GGGCCTCATG GTCGCGCTCG CGGCGGAGTC CGCCGTGAAG
CTCGTCGCGT TCATCGCCGC CGGCCTGTAC GTGACGTACG GTCGCTACGA CGGGCTGACC
GACGTGTTCC AGCGCGCGGC GGCGGCGCCG GCGCCGCTGG TGCCGGACCT CCTCGGGGGC
CAGGGGGTGG TCACCTGGCT GCTGCACCTG CTCGTCGCCG GCGTCGCGGT CGTCCTCCTG
CCGCGCCAGT TCCACGTCGC GGTCGTCGAG GCCTCCGACG AGCGCCACCT GCGCACCGCG
ATGTGGCTGT TCCCGGCCTA CCTGCTCGCG ATGAACGTCT TCGTCCTGCC GATCGCCCTC
GGCGGGCTCC TCCTCGGCCT CCCCGTGGCG CAGGCGGACT CGTTCGTCCT GTCGCTGCCG
CTCGAGGAGG GACGCAACGC GCTCTCGTGG CTCGTCTTCC TCGGCGGGTT CTCCGCGGGG
ACGGGGATGA TCATCGTCGA GACGACGGCG CTGGCCACGA TGATCTCGAA CGACGTGGTG
GTGCCAGCCG CCGACCGGTT CCGTCCGCTC GCGGGCCTGG GCCGGCACCT CCGGCCCGTG
CGGTGGGTCA GCGCCGCGGC GATCCTCGCC GCCGCGTTCG CGTACGAGCG CGCGTTCGGC
GCGCAGTACT CGCTCGCGTC GATCGGGTTC GTGTCCTTCG TGGCGGTGCT CCAGCTCGCG
CCCGCGGTGG TGGGGGTCCT CTTCTGGCCG GGCGCGAGCC GCACCGGCGC CGTCGCCGGC
ATGTCCCTGG GGATCGCGGC GTGGGTGTAC ACGCTCGTGG TGCCGGTCCT GGCGCGCTCC
GGATGGCTCC CGGAGTCGAT CCTCACCCTG GGGCCGTTCG GGATCGAGCC GCTCCGTCCC
GAGGGGCTCC TCGACGTGCA CCTCGACGCC GTCTCCCACG CGGTGCTGTG GACGCTGGTC
CTGAACGGCG GCGCGTTCGC CGTGGGGTCG CTCCTGTTCC CGCCCTCGTC CGAGGAGCTC
GCCCGGGCCG AGCGCATCGT CGGCCTCCGC GCCCCGCCGC TCGCGCGCGA CGCGGACGAG
AGCCCGAGGG TGGCGCGCGT CGAGGACAAG CGCGCCGCCG CAGCGGCGCT CCTCGCGCGG
TACCACGGAG AGGAGGACGG CGCCCGCCTC GCCGAGGAGT GCCTCGCCCG GGCAGGCGCG
CCGCGGGAGG GCGGGCTCTC GGCGATCCAG CTCGCGCAGC TGCAGGCCGA GGTCGAGACG
ACGCTCGCCG CCGCCATCGG CAGCGCCGGC GCGCACGCGG CGCTCCGGCG CAACCCGCTC
GTGCTCCCCG AGGAGTCCCG CGCCATCTCG GCGGCGTACG CCGAGATCCT CACCTCGCTC
CAGGTCTCGC CCGCCGAGCT CGAGCGCAAG CGGGAGTACC ACCGCGAGCG CGAGCGACTC
CTCCTCCACG AGGCCGAGGC GCAGCGGCTC CTCGCGGAGA TCAGCGGCCG GCTCGGCGCG
TCGCTCGCGC TCGAGGACGT GGCGCGCGCG GCGGTGCGGC TGCCGGTCCC GCAGCTCGCG
CAGGCGGCGG TGCTGTGGCT CGCCCCCGCC GGCGGGAGGC CGGGGCGAGC GTGGGTGGCG
CACCCCGATC CGGAGCGCGA GGGGGCGGCG CGGGAGGCGG CGGAGCGCGC GGCGGCGCAC
CTCGAGGAGG TGACGAGCGT CTCGCGCGCG CTCGCGACGG GGCGGCCCGT CGTGCGCCCG
GAGGGGCCGG ATCCGGGGTG GCCGGAGCCG CTGCGCGCGG CGGTCGGGCG CATGCGCGAG
CTGACGCTGC CGCTGCTCGC CGGCCGGAAG CCCCTCGGCT CGCTCACGCT CCTCGGTGCG
CCGCGGTCGG AGGGCGCGGA CGACATCGCC CTCGCGGAGG AGGTCGCGCG GAGGCTCGCC
ATCGCGCTCG AGAACGCCCG CCTCTACGAG CGCGCGGAGG AGGCGGTGCG GGCGCGCGAC
GAGTTCCTCG CCGTGGCCTC GCACGAGCTG AAGACCCCGC TCACGCCGCT CCGGATCCGG
ATCCACGCCC TCGAGCGGCT CGTCGCGCGG GACGAGCTCG CGAGCGTCCC CCGCGAGAAG
CTCGTCCAGC TCCTCTGCGG CGCCGAGGAG CAGGTGCTGC GCGTCGTGGG CCTCGTCGAC
GATCTGCTCG ACGCCACTCG CATCTCCGCC CGGCGGCTGA AGCTCCGGCC CGAGCCGATG
GACCTGGTGG CGAGCGTGCG CGCGGTCGTC GAGCGCCACG CGACGGAGCT CGCCGAGGCG
CGCTGCGCGG TCCACGTGGA CGCGCCCGAC GAGGCGCGGG GCGTCTGGGA CCGCCTGCGG
GTGGAGCAGG TGATCACGAA CCTCCTGCTC AACGCGGCGA AGTACGCGCC GGGGACGCGC
GTGGACGTGC GCGTTCGATC CGACGGCGCG CGCGCCTGCG TCGCGGTGCA CGACGGGGGG
GCCGGCATCT CGCCGGAGGA TCAGGAGCGC ATCTTCCTGC CCTTCGAGCG GGCCGCGCGC
TACCTGGAGG TGAGCGGGTT CGGGCTCGGG CTGTTCATCG TGCGCCAGAT CGTCGAGGCG
CACGGGGGCC GCGTGACGCT CGCGAGCGCC CCCGGGCAGG GGACGACGTT CACGATCGAG
CTGCCGCGCG CCACCGCGCC GCCCCCTGCG TGA
 
Protein sequence
MGDLGVPAAI VGAYLAALFG VAAWAERPAG RRLAATPLVY ALSMGVYATT WTFYGSVGFA 
AENGVLFLTV YLGPTLCAIA WWWTVRKLIR IKAEYRVTGL PDLLALRYER SHRVSLLATG
LLVVGLVPYL ALQLKTLSAT LGLVAGGTGA LAYPRVGDRV GPPLVALLVL FTVLFGLRRV
RPTERHPGLM VALAAESAVK LVAFIAAGLY VTYGRYDGLT DVFQRAAAAP APLVPDLLGG
QGVVTWLLHL LVAGVAVVLL PRQFHVAVVE ASDERHLRTA MWLFPAYLLA MNVFVLPIAL
GGLLLGLPVA QADSFVLSLP LEEGRNALSW LVFLGGFSAG TGMIIVETTA LATMISNDVV
VPAADRFRPL AGLGRHLRPV RWVSAAAILA AAFAYERAFG AQYSLASIGF VSFVAVLQLA
PAVVGVLFWP GASRTGAVAG MSLGIAAWVY TLVVPVLARS GWLPESILTL GPFGIEPLRP
EGLLDVHLDA VSHAVLWTLV LNGGAFAVGS LLFPPSSEEL ARAERIVGLR APPLARDADE
SPRVARVEDK RAAAAALLAR YHGEEDGARL AEECLARAGA PREGGLSAIQ LAQLQAEVET
TLAAAIGSAG AHAALRRNPL VLPEESRAIS AAYAEILTSL QVSPAELERK REYHRERERL
LLHEAEAQRL LAEISGRLGA SLALEDVARA AVRLPVPQLA QAAVLWLAPA GGRPGRAWVA
HPDPEREGAA REAAERAAAH LEEVTSVSRA LATGRPVVRP EGPDPGWPEP LRAAVGRMRE
LTLPLLAGRK PLGSLTLLGA PRSEGADDIA LAEEVARRLA IALENARLYE RAEEAVRARD
EFLAVASHEL KTPLTPLRIR IHALERLVAR DELASVPREK LVQLLCGAEE QVLRVVGLVD
DLLDATRISA RRLKLRPEPM DLVASVRAVV ERHATELAEA RCAVHVDAPD EARGVWDRLR
VEQVITNLLL NAAKYAPGTR VDVRVRSDGA RACVAVHDGG AGISPEDQER IFLPFERAAR
YLEVSGFGLG LFIVRQIVEA HGGRVTLASA PGQGTTFTIE LPRATAPPPA