Gene Anae109_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1488 
Symbol 
ID5377251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1688701 
End bp1689531 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content74% 
IMG OID640842999 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_001378679 
Protein GI153004354 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.143694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG AACCCACGCT CATCGCGGCC CTCGAATGCA GCGACGTCGA GCGCTCGGTC 
GATCCGTACC TCGACCGCGA GTTCGACGAG CGCGAGCGGG CCGAGATGGA CGTCCACCTC
ACCGCGTGCC CGCGCTGCCG GTCGATGGTG GAGCGGCAGG CGCGCGTCCG CGCCGCCGTC
CGCGCGAAGC TCCGCGAGGC GCTCGGCAGC GACTCGCCCG CCGGACGTGC CCCGCCCGCC
CTGCGCGCCC GCATCGAGGA GTCCCTCGCG CGGAGACGCC TCCCGCTCTG GCGCCGGGCC
CTCTCGCCCG TTCCCCTCGC CACCCTCGCG GCCTGCGTCG CGGGCGTGCT GCTCGTGCTC
TGGCTCGACC CGCTCGGCCA CGGCGACAGC CCGCTCGTCG AGGACGCCAT CCGCAAGCAC
CACCGCGAGC TCCCGCTCGA GGTGACCTTC ACGGATCCGG AGAGCGGCAT CCCCGGCTGG
TTCGCCGGGA AGCTCGACTT CAACCCCGCG CCGCCCCGCT TCCGCACCGC AGGCGTGCAG
GTGCTCGGCG CGCGCCTCTC GCACATCGGC GCGTGGCCGG CGGCGTACAT CCGGTACCAG
CTCCCGCGCG GCCAGGCCGG CCTGTTCATC GTGGACGACC CCGACGGCCG CTTCGACACG
TCCGGGCGCG AGGTGAAGAT CGGCTCGCAC AAGGTCCGGA TCGCGGCCGC CCGCGGATAC
AACGTGGCGG TCTGGCGCCA GGACGAGATC GTCTACTCCC TCGTCTCCGA TCTCGACGAG
GGCCAGCTCT TCGAGCTCGT GCAGACGGCC CAGGCCGACG CGGCCCGGTA G
 
Protein sequence
MAIEPTLIAA LECSDVERSV DPYLDREFDE RERAEMDVHL TACPRCRSMV ERQARVRAAV 
RAKLREALGS DSPAGRAPPA LRARIEESLA RRRLPLWRRA LSPVPLATLA ACVAGVLLVL
WLDPLGHGDS PLVEDAIRKH HRELPLEVTF TDPESGIPGW FAGKLDFNPA PPRFRTAGVQ
VLGARLSHIG AWPAAYIRYQ LPRGQAGLFI VDDPDGRFDT SGREVKIGSH KVRIAAARGY
NVAVWRQDEI VYSLVSDLDE GQLFELVQTA QADAAR