Gene Anae109_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1434 
Symbol 
ID5377017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1624998 
End bp1625579 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content75% 
IMG OID640842945 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001378625 
Protein GI153004300 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACCTGG ATCCGGCGAA CCTCGAGGCG AGGAGCCGCG CGCTCCTGGC GGCGGGAGAC 
GACCGAGCGG CAGCCACGAT GGTCCTGCGC GAGCTGGGCC CCCAGGTGGT GCGCTACCTG
CGCTCCGTGC TTCGCCACGA GGACGACGCC GCGGAGGCGT TCTCCTCCTT CGCCGAGGAT
CTCTGGCGCG GGCTCCCGGC GTTTCGCTGG GAGGCCCCCC TGCGCAGCTG GGTGTTCCGC
GTCGCCTGGC ACGCGGCGCT CGCGGTGCGG AACGACGCCT TCCGGCGGCA CGGCCGGCGG
CTCGAGACCG GGGAGGCGTC CGCCCTGGCG GCGGAGATCC ACACGACGGC CGCGCGCGTC
GAGCTGCAGC GCCGCGCGCT CGGCGCGCTC CGCGACGCGC TCTCTCCCGA GGAGCAGTCG
CTGCTCGCCC TGCGGGTGGA TCAGCAGCTG CCGTGGGAGG AGGTCGCGGT CGTCCTGACG
GGAGAGGCCG ACGCGCGGAG CGTCGCGGCG CTGCGGAAGC GCTTCGAGCG GCTGAAGGAG
CGCATCGCCC GGCTCGCGCG AGAGCGCGGC GTCCTCGAGT GA
 
Protein sequence
MYLDPANLEA RSRALLAAGD DRAAATMVLR ELGPQVVRYL RSVLRHEDDA AEAFSSFAED 
LWRGLPAFRW EAPLRSWVFR VAWHAALAVR NDAFRRHGRR LETGEASALA AEIHTTAARV
ELQRRALGAL RDALSPEEQS LLALRVDQQL PWEEVAVVLT GEADARSVAA LRKRFERLKE
RIARLARERG VLE