Gene Anae109_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1405 
Symbol 
ID5376441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1587989 
End bp1588825 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content69% 
IMG OID640842915 
ProductABC-2 type transporter 
Protein accessionYP_001378596 
Protein GI153004271 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.842674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.590881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGAG CCACGATCGA GGAGCGGCCC GGAGCACCAC GCACGAGCGC CGTGGCCAGC 
TCCGTCCGCG ACGTCTTCAA GTACCGCGAG CTGCTGATGC TGCTCGTCGC GCGCGATCTC
AAGGTCCGCT ACAAGCGCAG CTCCGTGGGG ATGCTCTGGA CGCTCCTCAA CCCGCTGCTG
CAGATGATCG TCTACACGCT CGTCTTCTCG ACCATCATGC GCATCGGGAT CGAGGGCTAC
CCGGTCTTCC TCCTCTCCGG GCTGTTGCCG TGGACCCTCG TCTCGGTGGG ATCCGTCTCC
GCCTCGATGT CGCTGCTCGG GAACCAGAGC CTCATCCGCA AGGTCGCCGT CCCGCAGGCG
GTCTACCCGC TCGCGGCCGT GGGCTCGAAG CTCACCGACG CCGTGCTCTC CCTCCCGGCG
CTGGCGCTCC TCGCCGTGGC GCTCGGCCGT CCACCGGGGG TGTCGTGGCT CGTCGTCCCG
CTCGCGTTCG TGCTCGCGGC CGCGTTCACG ACGGGGCTCG CGCTGCTGTT CAGCTCGCTG
TCGGTGTTCT TCCGGGACGT CCGCCACCTG ATCGACGTGC TGTTCCAGAT CTGGTTCTAC
GTGACGCCGG TGATCTACCC GGCGTCGTTC CTCGAGGGGC TGCACCCCCT CCTGCGCACC
GCGCTGGCGC TGAACCCCGC CTCGCCGATC GTGCGGGTGT TCCAGATGAG CATCTACGAG
GGGCGGATCC CGCCCGCGTC CACCCTGGGG CTCGCGGTGC TCGCCGCGGC CGCTTCGCTC
GCCGTCGGCG GCACCTTCTT CGTGCGGTCC GAGCACCGCC ACATCCACAA CTTCTGA
 
Protein sequence
MSGATIEERP GAPRTSAVAS SVRDVFKYRE LLMLLVARDL KVRYKRSSVG MLWTLLNPLL 
QMIVYTLVFS TIMRIGIEGY PVFLLSGLLP WTLVSVGSVS ASMSLLGNQS LIRKVAVPQA
VYPLAAVGSK LTDAVLSLPA LALLAVALGR PPGVSWLVVP LAFVLAAAFT TGLALLFSSL
SVFFRDVRHL IDVLFQIWFY VTPVIYPASF LEGLHPLLRT ALALNPASPI VRVFQMSIYE
GRIPPASTLG LAVLAAAASL AVGGTFFVRS EHRHIHNF