| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_1324 |
|---|
| Symbol | |
|---|
| ID | 5374402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 1496968 |
|---|
| End bp | 1498170 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640842835 |
|---|
| Product | protein-export membrane protein SecF |
|---|
| Protein accession | YP_001378516 |
|---|
| Protein GI | 153004191 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0920366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.32495 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTCA AGAGCTTCGA CATCGTCCCC CACGGCACGA AGTTCGACTT CGTCGGGAAG
CGCCACATCG CGGTGGTGCT CTCGCTCATC GTCAACGCGG CCGTCCTCCT CTGGGCGGTG
CCCGCCATCC ACGGCCTCAA CTTCGGCGTG GACTTCGCGG GCGGCACCGA GATGGAGGTG
AAGTTCGCGC AGCCCGTCGA CGCGGGCGCG ATCCGCAAGA GCGTCGAGGA CCTCGGCTTC
AAGGGCGCGT CCGTCCAGAC CTACGGCGAC GAGGAGGAGC ACGCGTTCCT CATCCGCGTC
GAGCGCATCG CGCTCATGGG CGAGGAGGAC GTGAAGCGCG TCGTCGACGC GGTCCAGGCG
AAGTTCCCCG TCGAGCGCTG GAGCTTCAAC CCCGAGATCG GCGACAAGAT CGACTTCGAG
TTCAAGCAGC CGCCGAGCCC GCAGGCGCTC CAGGCCGCGG TCGAGGGCGC CGGCGTGGGC
GTCCGCGAGG TGCGCGCCGA GCAGGGCCTC GCGGCCGGCA CCCGGTCGTT CGCGGTCATC
ACGCAGGGCA TCCGCGAGAA GATCGAGCGC GACCTCTCGA CGCACTTCGC CCAGGCGCAG
CCGGAGGTGC GGCGCGTCGA GTACGTCGGC CCGGCGGTCG GCCGCGAGCT GCGCAACCAG
GGCTTCAAGG CCGTGCTGTA CGCGATGGCG CTCATCGTCG TGTACGTCGG CCTGCGGTTC
GACTTCCGCT TCAGCCCCGG CGTGATCATC GCCATCCTCC ACGACGCCAT CGTCACCCTG
GGCTACTTCG CCTTCACCGG GCGCGAGTTC AACCTCACCT CCATCGCGGT GCTCCTCACG
GTGGTCGGCT ACTCGGTGAA CGACACCGTC GTGGTCTACG ACCGCATCCG CGAGAACCAG
GCGAAGTACA AGGGCAAGTC CCTCGCCGAG ATCGTGAACC TCTCGATCAA CGAGACCCTG
GGCCGGACCT TCCTCACCTC GTTCGCGACG GCCCTCTCGC TGGTCGGCCT GCTCGTCTAC
GGCGTCGGGA CGCTCTTCGA CTTCTCCGCC GCCATGCTCG TCGGAATCGT CTCCGGCACC
TACTCGACGT GGTTCATCGC CGCTCCGATG ACGATCTGGT TCGAGGAGCG GGCGGCCAAG
AAGAAGGCCT CGACCCCCGC CGCCGCGGCG CCGTCCGCGC CCGGGCGCGC CGCCCAGAAG
TAG
|
|---|
| Protein sequence | MRFKSFDIVP HGTKFDFVGK RHIAVVLSLI VNAAVLLWAV PAIHGLNFGV DFAGGTEMEV
KFAQPVDAGA IRKSVEDLGF KGASVQTYGD EEEHAFLIRV ERIALMGEED VKRVVDAVQA
KFPVERWSFN PEIGDKIDFE FKQPPSPQAL QAAVEGAGVG VREVRAEQGL AAGTRSFAVI
TQGIREKIER DLSTHFAQAQ PEVRRVEYVG PAVGRELRNQ GFKAVLYAMA LIVVYVGLRF
DFRFSPGVII AILHDAIVTL GYFAFTGREF NLTSIAVLLT VVGYSVNDTV VVYDRIRENQ
AKYKGKSLAE IVNLSINETL GRTFLTSFAT ALSLVGLLVY GVGTLFDFSA AMLVGIVSGT
YSTWFIAAPM TIWFEERAAK KKASTPAAAA PSAPGRAAQK
|
|---|
| |