Gene Anae109_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1311 
Symbol 
ID5375749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1482877 
End bp1485093 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content68% 
IMG OID640842822 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_001378503 
Protein GI153004178 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCACC GGGGCACGAA CCGATACGCT CGCACGACCG GCTTGCTGCG CCTCAACGAC 
ATCCTGGACC GGGTCGCCGG CTACCATCCG GGTCCCGACC TGGACCTGAT CAAGAAGGCG
TACGTCTACT CCGCCAAGGT CCACCAGGGG CAGATCCGGA AGTCGGGCGA GCCGTACCTC
ATCCATCCGC TCGAGGTCGC GGGCCTCCTG GCCGAGCTCA AGCTCGACGA GGCTTCGGTC
GTCACGGGGC TCCTCCACGA CACCATCGAG GACACCCTCG CGACGAAGGA GGAGATCGCG
GAGCTGTTCG GGCCCGAGAT CGCGGAGCTG GTCGACGGCG TCACCAAGCT CTCCCAGTTC
AGCGCCGCGA ACACCCAGGA GGAGAAGCAG GCCGAGAACT TCCGCAAGAT GGTCGTGGCG
ATGGCGAAGG ACATCCGCGT CCTGCTCGTG AAGCTCGCCG ATCGCACGCA CAACATGCGG
ACCCTGGACC ACATGAAGCC GGAGTCGCAG GAGCGGATCG CGCGCGAGAC GCTCGACATC
TACGCCCCGC TCGCGAACCG GCTCGGGATC CAGTGGCTGA AGAGCGAGCT CGAGGATCTC
TCGTTCAAGT ACCTGCGGCC GCAGGACTAC GTCGAGCTGT CGACGCGCGT CGAGGCGGAG
CAGAAGGAGA AGGGCGAGTT CGTCGAGGAG GTGGTCGACC TCATCCGCAC CCGCCTCACC
GGCGCCGGCA TCAACGCGCA GGTCTCGGGG CGCGTGAAGC ACGTCTACTC GATCTGGCGG
AAGATGCGGC AGCTCGACGT GGACTTCGAT CAGATCCAGG ACGTCATCGG CTTCCGCGTG
ATCGTCGACT CGGTGGCCGA GTGCTACGAG TCGCTCGGCA TCATCCACTC GCTGTGGAAG
CCGGTGCCGG GCCGCTTCAA GGACTACATC GCGATCCCGA AGCCGAACCT GTACCAGTCC
CTCCACACGA CCGTGGTCGG GCCGCGCGGC GAGCGCATCG AGGTGCAGAT CCGCACCAAG
GAGATGCACC GGATCGCCGA GGAGGGCGTC GCCGCCCACT GGGCGTACAA GGAGAAGGGG
CGGGACGGGA AGGGCGCCGA GCTCTCGAAG AAGGACGCGG AGAGCTTCGG CTGGCTGCGG
CAGCTCGTCG AGTGGCAGCG CGAGCTCGCC GATCCGCGCG AGTTCCTGGA GACGGTCAAG
GTCGACCTCT TCTCCGACGA GGTCTTCGTC TTCACGCCGA AGGGCGCGGT GAAGAGCCTG
CCCCGCGGCG CCACGCCCGT GGACTTCGCG TACACCATCC ACTCCGAGGT GGGCGAGCAC
ACCGTCGGCG CGAAGGTGAA CGGCAAGCTC GTACCGCTCC GCTACAAGCT CAAGAACGGC
GACACGGTCG AGATCCTCAC CTCGCCGAAC GCGCACCCCT CGAAGGACTG GCTCAGCTTC
GTCAAGACGA GCCGGGCGCA GGCCCGCATC CGGCAGTTCA TCCGGCAGGC GGAGCACCGC
CGCTCCCTCG AGATCGGGCG CGACGTGGCG GAGCGCGAGT TCCGGCGCTT CGGCGTGGCG
CTCGGGAAGG TGCAGAAGGG CGGCGAGCTC GAGAAGGCGG CGCAGTCCCT GGGCTACCGG
GCGGCGGACG ACCTCCTCGC CGCCATCGGC TACGGCAAGG TCGCGCCGGC GGAGGTGATC
CGGCAGCTGG TCCCCGCCGA CAAGCTGGCC GAGACCGCGC CCACCGAGCC GTCGCCGACC
TCGCGGCTCA CCGAGATCTT CCGCAAGGTG GCGCGCCGCC CGGCGGGCGG CGTGCGCATC
AACGGCATCG ACGACGTGCT CGTGCGCTTC GGGCGCTGCT GCAACCCGGT GCCGGGCGAC
TCGATCGTCG GCTTCATCAC CCGGGGGCGA GGCGTGACCG TCCACACGCT GGCCTGCGAC
AAGGTCATGG AGATCGTGCC GGAGCGGCGC GTCGACGTCG CGTGGGACGT GAAGGGCGAC
TTCAAGCGCC AGATCTCGAT CCGGGTCATC ACGAGCGATC GCCCCGGCAT CCTCGCGAAG
ATCTCGCAGA TCTTCAGCGA GGCCGGGCTC AACATCTCTC AGGCGAGCTG CCGCACGACG
CCCGGCGAGC GCGCCGTGAA CGACTTCGAG GTGACGGTCG GAGACCTGAA GCAGCTCAAC
TCGGTCATCC GCAACCTCGA GCGGATCGAG GGCGTCCAGT CCGTCGAGCG CGTCTGA
 
Protein sequence
MPHRGTNRYA RTTGLLRLND ILDRVAGYHP GPDLDLIKKA YVYSAKVHQG QIRKSGEPYL 
IHPLEVAGLL AELKLDEASV VTGLLHDTIE DTLATKEEIA ELFGPEIAEL VDGVTKLSQF
SAANTQEEKQ AENFRKMVVA MAKDIRVLLV KLADRTHNMR TLDHMKPESQ ERIARETLDI
YAPLANRLGI QWLKSELEDL SFKYLRPQDY VELSTRVEAE QKEKGEFVEE VVDLIRTRLT
GAGINAQVSG RVKHVYSIWR KMRQLDVDFD QIQDVIGFRV IVDSVAECYE SLGIIHSLWK
PVPGRFKDYI AIPKPNLYQS LHTTVVGPRG ERIEVQIRTK EMHRIAEEGV AAHWAYKEKG
RDGKGAELSK KDAESFGWLR QLVEWQRELA DPREFLETVK VDLFSDEVFV FTPKGAVKSL
PRGATPVDFA YTIHSEVGEH TVGAKVNGKL VPLRYKLKNG DTVEILTSPN AHPSKDWLSF
VKTSRAQARI RQFIRQAEHR RSLEIGRDVA EREFRRFGVA LGKVQKGGEL EKAAQSLGYR
AADDLLAAIG YGKVAPAEVI RQLVPADKLA ETAPTEPSPT SRLTEIFRKV ARRPAGGVRI
NGIDDVLVRF GRCCNPVPGD SIVGFITRGR GVTVHTLACD KVMEIVPERR VDVAWDVKGD
FKRQISIRVI TSDRPGILAK ISQIFSEAGL NISQASCRTT PGERAVNDFE VTVGDLKQLN
SVIRNLERIE GVQSVERV