Gene Anae109_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1128 
Symbol 
ID5374078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1279731 
End bp1280783 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content71% 
IMG OID640842636 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001378320 
Protein GI153003995 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.320103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00101807 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGCCCC CCATGACCCA CAGATTCCTC GAAGCCTGCC GAAAGCAGCC CGTCGATCGT 
CTGCCCGTCT GGATGATGCG CCAGGCCGGA CGCTACCAGC CGTCCTACCG CGCCGTCCGC
GCGAACGTCG GCTTCCTGGA GCTGTGCCGC TCGCCGGAGC TCATCGCGCA GGTGACGGTC
GCGCCCATCG ACGAGTTCGG CTTCGACGCC GCCATCCTGT TCTCCGACAT CCTCGTCCAC
CTCCCGGCGA TGGGGCTCGA CCTCTCCTTC GAGAAGGGCG AGAAGGGCAA GGGGGACGGC
GGCCCGAAGA TCGCGAACCC GGTCCGCACG CGCGCGGACG TGGACGCGCT GAAGGTCCCC
GCGCCGAAGA AGGACCTGCC CTACGTGCTC GACGGCGTGC GCGCCATCCG CGCCGCCCTC
CGGGACCGCG TGCCGCTCAT CGGCTTCGTG GGCGGCCCGT TCACCGTCGC GAGCTACGCG
GTGGAGGGCG GCAGCCAGGG CTTCACGCGC CTGAAGACGA TGCTGTACGC AGAGCCGCGC
ACGGCGCACG CGCTCTTCGA GAAGCTCACC CAGGCGGCGA TCGTGCAGAT CGAGGAGCAG
ATCGCGGCCG GCGCGCAGGC CGCGCAGATC TTCGAGAGCT GGCTCGGCGA GCTCGACCGC
GCCGACCTCG AGGAGTTCGC GTTCCCGTAC CTCGCGCGCA TCGCGGAGGC CGTGAAGCGC
ACGGGCGTGC CGTCGATCTT CTTCTCGACC GGGACGACGG CCCACCTCGA GCCGATCTCG
AAGCTCGGCT ACGACGTCGT CTCCGTGGAC TGGCGCATCC CCATCGACGA GGCGCGCCGC
CGCGCGCCCG GCGTCGCCAT CCAGGGCAAC ATGGACTCCA CCGTCCTCCT CGGGCCGAAG
GAGGTCGCGG TCGAGCGCGC GCTGTCCATC GTGCGGGCGG CGGGCCGGGA GCCCGGCTAC
ATCTTCAACC TCGGCCACGG CATCCAGCCC GGTACGCCGA CCGAGACCGT GAAGGCCGTC
GTGGACGCGG TCCACGCCTT CGCCTGGAAG TGA
 
Protein sequence
MAPPMTHRFL EACRKQPVDR LPVWMMRQAG RYQPSYRAVR ANVGFLELCR SPELIAQVTV 
APIDEFGFDA AILFSDILVH LPAMGLDLSF EKGEKGKGDG GPKIANPVRT RADVDALKVP
APKKDLPYVL DGVRAIRAAL RDRVPLIGFV GGPFTVASYA VEGGSQGFTR LKTMLYAEPR
TAHALFEKLT QAAIVQIEEQ IAAGAQAAQI FESWLGELDR ADLEEFAFPY LARIAEAVKR
TGVPSIFFST GTTAHLEPIS KLGYDVVSVD WRIPIDEARR RAPGVAIQGN MDSTVLLGPK
EVAVERALSI VRAAGREPGY IFNLGHGIQP GTPTETVKAV VDAVHAFAWK