Gene Anae109_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1106 
Symbol 
ID5376199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1253293 
End bp1255428 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content71% 
IMG OID640842614 
Productglycogen debranching enzyme GlgX 
Protein accessionYP_001378298 
Protein GI153003973 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases 
TIGRFAM ID[TIGR02100] glycogen debranching enzyme GlgX 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.546818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.380802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCG ACGCCATCTG GCCCGGGCGG CCCTACCCCC TCGGCGCGAC CAACGACGAC 
GAAGGGACCA ACTTCGCCGT CTACGCGCGC GAGGCGGACG CGATCGACCT CTGCCTCTTC
GCGGCCGACG ATCCGTCGCG CGAGCTGCGC CGCGTCCGGC TCTCCGAGCG GACCGGCCAC
GTCTGGCACG CGTACCTGCC GGGCGTCGGC GCGGGGACGC CCTACGGGTA CCGCGCGCAC
GGACCGTACG AGCCCGAGGC CGGCCTCCGC TTCAACGGCG CGAAGCTGCT CGTCGATCCG
TACGCGCGCG CCATCTCCGG CGAGGTGGAC CTCGAGGGCC CGATCTTCTC GTATCGGCAC
GACGCGCCGG AGCAGGACCT CGCGCTCGAC GACCGCGACA GCGCCGCGGC GGTGCCGAGA
TCCGTCGTGG TGGGGAACCA CTTCGACTGG CGCGGCGATC GGCCGCCGCG CACCCCGCTG
CACCGCAGCG TGATCTACGA GGTGCACGTG AAGGGGTTCA CGGCGCGTCA CCCGGAGGTG
CCGCCGGAGC TGCGCGGCAC CTACGCGGGC TTCGGCTCGC CCCCGGCGAT CGCCCACCTC
CAGCGCCTCG GCGTGACCGC CGTCGAGCTC CTCCCCGTCC ACGAGTACCT CGACGACCCG
TTCCTCCGCT CGAAGGGCCT CACCAACTAC TGGGGCTACT CCACCCTGGG CTTCTTCGCG
CCCGAGCAGA AGTACGCCCG CGGCTCGCGC GGCGAGCAGG TGACGGAGTT CCGCGCCATG
GTGAGGGCGC TGCACGCGGC GGGCATCGAG GTCATCCTCG ACGTCGTCTA CAACCACACC
TGCGAGGGGA ACCACCTCGG CCCGACGCTC TCGCTGAAGG GGCTCGACAA CCGCACCTAC
TACCGCCTGG TGGCGGAGTC CCCGCGCTAC TTCTGGGACT CCACCGGCTG CGGGAACTCG
CTCGACACCA CGAACCCGCA GGCGCTGAAG CTCGTGATGG ACTCGCTGCG CTACTGGGTC
GAGGAGATGC ACGTCGACGG CTTCCGGTTC GACCTCGCCG TCACCCTCGC CCGCGATCCG
GAGCAGTTCG CGGAGGCGTC CCGCTTCCTG GCCGCCGTGC ACCAGGACCC GGTCCTGGAG
AGGGTGAAGC TCATCGCGGA GCCCTGGGAC GTCGCCCCTG GCGGCTACCA GGTCGGCGCC
TTCCCGGTGC GCTGGTCCGA GTGGAACGGG AAGTACCGCG ACGTCGTGCG GCGCTTCTGG
AAGGGCGACG AGAACCTGGC CGGCGAGATG GGCTACCGGC TCACCGGCTC CGCCGACCTC
TACGAGGCGG CGGGCCGGAA GATCTACGCG AGCGTGAACT TCGTCACCGC GCACGACGGC
TTCACGCTGC GCGATCTCGT GAGCTACGAC CGCAAGCACA ACGAGGCGAA CCTCGAGGAC
AACCGCGACG GGGCGGACGA CAACCACTCC TGGAACTGCG GCGCCGAGGG CGAGACGGAC
GACCCGGCGA TCCTCGCGCT CCGCGAGCGC CAGATGCGGA ACCTCATGGC GACGCTGCTG
GTCTCGCAGG GCGTCCCGAT GATCACCGCG GGCGACGAGT TGGGGAAGAC CCAGCGCGGC
AACAACAACG CCTACTGCCA CGACGACGAG CTCAGCTGGC TCGACTGGAA CCTCGACGAC
GGCCGCCGCG CGTTCCTGGC CTTCGTGCGG CGGATGATCC AGCTCCGCCT GGACCAGCCG
GTCCTGCAGC GGCGACGCTT CTTCCGCGGC GGCCGGCCCT GGGACTCGTC GCTCAAGGAC
CTGGCCTGGT TCCGGCCCGA CGGCGTCGAG ATGACCGAGG AGGACTGGCA GAGGCCCTTC
GCGAAGTCCG TGGCCTTCCT GCTCGGCGGC GACCAGATCG CGACGCCCGA CGAGCGGGGC
GAACGGATCG TGGGCGACTC GCTGCTCGTC CTGCTCAACG CCTCGCACGA GCGGGTCACC
TACGTCCTCC CCGACGTGGA CTGGGGGCGG GAGTGGGAGG TGCTCGTCGA CACGGCCGGC
GAGCTGGAGC AGAAGCGCGA GCACGTGGCC GCCCGCGGGT CGGTGCCGCT GGAGGCGCGC
TCCCTCGTGA TCCTCTCCCG CCCGGCCGAC CGCTGA
 
Protein sequence
MTSDAIWPGR PYPLGATNDD EGTNFAVYAR EADAIDLCLF AADDPSRELR RVRLSERTGH 
VWHAYLPGVG AGTPYGYRAH GPYEPEAGLR FNGAKLLVDP YARAISGEVD LEGPIFSYRH
DAPEQDLALD DRDSAAAVPR SVVVGNHFDW RGDRPPRTPL HRSVIYEVHV KGFTARHPEV
PPELRGTYAG FGSPPAIAHL QRLGVTAVEL LPVHEYLDDP FLRSKGLTNY WGYSTLGFFA
PEQKYARGSR GEQVTEFRAM VRALHAAGIE VILDVVYNHT CEGNHLGPTL SLKGLDNRTY
YRLVAESPRY FWDSTGCGNS LDTTNPQALK LVMDSLRYWV EEMHVDGFRF DLAVTLARDP
EQFAEASRFL AAVHQDPVLE RVKLIAEPWD VAPGGYQVGA FPVRWSEWNG KYRDVVRRFW
KGDENLAGEM GYRLTGSADL YEAAGRKIYA SVNFVTAHDG FTLRDLVSYD RKHNEANLED
NRDGADDNHS WNCGAEGETD DPAILALRER QMRNLMATLL VSQGVPMITA GDELGKTQRG
NNNAYCHDDE LSWLDWNLDD GRRAFLAFVR RMIQLRLDQP VLQRRRFFRG GRPWDSSLKD
LAWFRPDGVE MTEEDWQRPF AKSVAFLLGG DQIATPDERG ERIVGDSLLV LLNASHERVT
YVLPDVDWGR EWEVLVDTAG ELEQKREHVA ARGSVPLEAR SLVILSRPAD R