| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0991 |
|---|
| Symbol | |
|---|
| ID | 5375004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 1127792 |
|---|
| End bp | 1129042 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640842499 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001378184 |
|---|
| Protein GI | 153003859 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00118055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAC GCCCTCCCGA CCCCACCCCT CGCCCCCAGG GCTGGCTCGC CTTCTCCGTC
GTCGCCGTCG GCACCGTCAT GGCGACGCTC GACGGCAACA TCGTGAACGT CGCGCTCCCC
ACGCTCGCGC GCGAGCTGGG GGCGGAGGTG GGGCCGCTGC AGTGGGTGGT GAACGGCTAC
CTCATCGCCA TCACCGCCAC CCTCGTCCCG CTCGGCCGGC TCGGCGATCG CCTCGGGCAC
CGCGCGCTCT ACGCCGGCGG GCTGCTCGTG TTCACGGCCG GGTCGGCGCT GTGCGGGCTC
GCGGGCGGGC TCGGCGCGCT CGTGGCGGCG CGGGTGGTCC AGGCGCTCGG CGCGAGCGCC
ATGATGGCGA TCGGGCCCGC GATCGTCACC GCGGCCTTCC CGCCCACCGT GCGCGGGCGC
GCCCTCGGGG CGGTGGGCAC CGTCGTGGCG CTCGGGCTCA CCGCGGGGCC GCCGCTCGGC
GGGCTCATCC TCTCGCACCT CTCGTGGCGC TGGATCTTCT ACGTGAACCT GCCGATCGGG
CTGGCGGGGG CCGCCTGGGC GCTGCGCGTG CTCGCGCGCG GCGGCGGGAC CGCGGGCGGG
CCGCTGCTCG ATCTCGCCCT CTTCCGGATC CCTACCTTCT CGTGGGGCCT CGCGGCGGGG
CTGCTCTCCT ATGCGGCCAT GTTCTCGCAG ACGTTCCTGA CGCCGTTCTT CCTCGCGCGC
GTGCTCGGGC TCGCGCCGGG CGCGCTCGGG CTCGTCCTCG CCGCCGTTCC GCTGGCGCTC
TCGGTGGCGT CCCCGCTCGC GGGATGGATC TCCGATCGCT TCGGGGAGCG CCGCCTCCCG
GCCGCCGGGA TGCTGCTCGT CGCGGCCGGC CTGGTCGCGC TGTCCTCCGC CCGGGCGGAC
GGAGGGGTGG CCTCGGTCGC CGCGCGGCTG GCGCTCTGCG GCGCGGGCAT GGGGCTCTTC
CAGGCCCCGA ACAGCGCGCT CGTGATGGGC GCGCTCCCGC GCGGCCGGCT CGGCTCGGGC
GGAGGACTGC TCGCGACGGC CCGCAACGCC GGGATGGCCC TCGGCGTGGG GCTCGCCGGT
GTCCTCTTCG CGCTGCGCGC CGGGCCGGGC GCGCGCGGCG AGGCGTTCCT CGCGGGCTAC
GCGCTCGCCC TCCGCGCCGG CGCGGGGCTG GCGCTGCTCG CCGCGGCGGC GTCGCTGGCG
CGCGGCCGCG CCGCTCCGCC GGCCCGGCCC GCCCCGCCGC GCGCCGCATG A
|
|---|
| Protein sequence | MSPRPPDPTP RPQGWLAFSV VAVGTVMATL DGNIVNVALP TLARELGAEV GPLQWVVNGY
LIAITATLVP LGRLGDRLGH RALYAGGLLV FTAGSALCGL AGGLGALVAA RVVQALGASA
MMAIGPAIVT AAFPPTVRGR ALGAVGTVVA LGLTAGPPLG GLILSHLSWR WIFYVNLPIG
LAGAAWALRV LARGGGTAGG PLLDLALFRI PTFSWGLAAG LLSYAAMFSQ TFLTPFFLAR
VLGLAPGALG LVLAAVPLAL SVASPLAGWI SDRFGERRLP AAGMLLVAAG LVALSSARAD
GGVASVAARL ALCGAGMGLF QAPNSALVMG ALPRGRLGSG GGLLATARNA GMALGVGLAG
VLFALRAGPG ARGEAFLAGY ALALRAGAGL ALLAAAASLA RGRAAPPARP APPRAA
|
|---|
| |