Gene Anae109_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0875 
Symbol 
ID5378348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1000866 
End bp1001369 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content75% 
IMG OID640842382 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001378068 
Protein GI153003743 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.015074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0957529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTCG ACGTCGACGC GTACTACCGG GACCTCGCGC CGATGGTCCT GCGCCGCTGC 
CGCCGCCTCC TGCGTGACGA GGAGAAGGCC GTGGACGCCA TGCACGACAC GTTCGTGAAC
CTGCTCCGGG CGGAGGACCG GCTCCGGGAC GAGGCCCCCT CGTCCCTGCT CCTCCGCATC
GCCACCCGCG TGTGCCTGAA CCTGCTCCGC TCCGAGCGGC GCAAGCCGGA GGACCGCGAC
GAGGAGGCGC TCCTCGACAT CGCGGCGTCG GACGAGCCCG AGGCGCGCTC GCTGTCGCGC
CTCGTGGTCT CGCGCCTGCT GGGCCGCGAG CAGGAGTCCA CCCGGGTGAT GGCGGTGCTC
CACTACGTGG ACGGCCTCAC GCTCGAGGAG GTCGGGCGCG AGGTGGGGCT CACCGCGGCC
GCGGTCCGCA AGCGGCTGGG CGGGCTCCGG CGGCGCGTCG CGGAGCAGGC CGGCGGGGCG
CCGGCGAAGG AGGTGCAGCG ATGA
 
Protein sequence
MAVDVDAYYR DLAPMVLRRC RRLLRDEEKA VDAMHDTFVN LLRAEDRLRD EAPSSLLLRI 
ATRVCLNLLR SERRKPEDRD EEALLDIAAS DEPEARSLSR LVVSRLLGRE QESTRVMAVL
HYVDGLTLEE VGREVGLTAA AVRKRLGGLR RRVAEQAGGA PAKEVQR