Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_0875 |
Symbol | |
ID | 5378348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 1000866 |
End bp | 1001369 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640842382 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001378068 |
Protein GI | 153003743 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.015074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.0957529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGGTCG ACGTCGACGC GTACTACCGG GACCTCGCGC CGATGGTCCT GCGCCGCTGC CGCCGCCTCC TGCGTGACGA GGAGAAGGCC GTGGACGCCA TGCACGACAC GTTCGTGAAC CTGCTCCGGG CGGAGGACCG GCTCCGGGAC GAGGCCCCCT CGTCCCTGCT CCTCCGCATC GCCACCCGCG TGTGCCTGAA CCTGCTCCGC TCCGAGCGGC GCAAGCCGGA GGACCGCGAC GAGGAGGCGC TCCTCGACAT CGCGGCGTCG GACGAGCCCG AGGCGCGCTC GCTGTCGCGC CTCGTGGTCT CGCGCCTGCT GGGCCGCGAG CAGGAGTCCA CCCGGGTGAT GGCGGTGCTC CACTACGTGG ACGGCCTCAC GCTCGAGGAG GTCGGGCGCG AGGTGGGGCT CACCGCGGCC GCGGTCCGCA AGCGGCTGGG CGGGCTCCGG CGGCGCGTCG CGGAGCAGGC CGGCGGGGCG CCGGCGAAGG AGGTGCAGCG ATGA
|
Protein sequence | MAVDVDAYYR DLAPMVLRRC RRLLRDEEKA VDAMHDTFVN LLRAEDRLRD EAPSSLLLRI ATRVCLNLLR SERRKPEDRD EEALLDIAAS DEPEARSLSR LVVSRLLGRE QESTRVMAVL HYVDGLTLEE VGREVGLTAA AVRKRLGGLR RRVAEQAGGA PAKEVQR
|
| |