Gene Anae109_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0872 
Symbol 
ID5378345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp998277 
End bp998702 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content72% 
IMG OID640842379 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001378065 
Protein GI153003740 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.532124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.142279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC ACTCGAACGG CAGCGACGAG GCGATCACCG GCATCAACGT GACGCCGCTC 
GTCGACATCA CCCTCGTCCT CCTCATCATC TTCATGGTCA CCGCGTCGTA CATCGTGAAG
GAGGGGATCG AGGTCGACCT GCCCCGCGCC GCCCACGGCG GCGAGACGGT CGGCCCGACC
CTGGCCTTCG CGATCGATCG GGACGGGAAG CTCTACCTGG ACGGTCAGCC GGTCGGCCGC
GACGCGGCGC GCGCGGCCGT GCGCGCGGCG CTCGCCAGGA GCGCCGAGGC GCGGGCGCTC
ATCGGCGCCG ACCGGGCGGT GCCTCACGGC GAGGTGGTGT CCGTCATCGA TCTGGTGAAG
AGCGAGGGGC TGACGCGCTT CGCGATCCAG ATCGAGCGGG ACGCCTCGGG AGAAGGCGCG
CCGTGA
 
Protein sequence
MAAHSNGSDE AITGINVTPL VDITLVLLII FMVTASYIVK EGIEVDLPRA AHGGETVGPT 
LAFAIDRDGK LYLDGQPVGR DAARAAVRAA LARSAEARAL IGADRAVPHG EVVSVIDLVK
SEGLTRFAIQ IERDASGEGA P