| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0870 |
|---|
| Symbol | |
|---|
| ID | 5375424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 994937 |
|---|
| End bp | 997534 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640842377 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_001378063 |
|---|
| Protein GI | 153003738 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.306843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.658242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCC CGCCCATCGT CTTGCTCTCG CTGCTCGGCC TCGCCGTCGT CGCCGCGGGC
GCCGCCCCCG CGCTCGCGCG GGGACAGCCG CAGGAGACCG GCGTCCTCAC GCGCGCCCCC
GAGGTGATCC AGCCGGTCGA GCCCGAGTAC CCCGAGGCCG CGCGGGCGGC CGGCCTGACC
GGCGTCGTGA TGCTCGAGGT CGAGATCTCC GAGACGGGCG AGGTCACCGA CGCGGTGGTC
ACCGGCCCCG CCGGTCAGGG CTTCGACGAG GCGGCCCTCG CCGCCGCCCG GAAGCTCCGC
TTCTCCCCCG CGGAGATCGA CGGAGCGCCC GCGCCCGTCC GCATCGAGTA CCGCTTCACG
TTCTCGCTCT CCGCGCCGCC CGCCGCCCCC GCGCCGCCGC CCGTGAACCT CCTCGGCCGC
GTGCTCGAGC GCGGCACCCG CCTCCCGGTC GCGGGGGCGA TGGTGGAGGC GGGCGGCCAG
CTCACCCACA CGGACGGCGA CGGCCGGTTC GCGCTCGCGG GCGTGGCGGA CGGCGCGGTG
CAGGTGGTGG TGACGGACGT CGACCACGTC CGCCTCGACT CGACCGAGAC CATCGAGCCG
GGGAACGCGA CCCAGGTGAC CTACTGGCTC CAGAAGACCG CCGCCCAGGG CGAGTACGAG
GCGGTCGTGG TGGGCGAACG GGAGGAGAAG CAGGTCTCGC ACGTCGCCAT CGCGGCGGGG
GAGATCCGGC GCGTGGCGGG CGCCTCCGGC GACGCGGTGA AGGTGATCCA GAACCTCCCC
GGCATGGCCC GCTCCTTCCT GAGCGGCGAG CTGATCGTCC GCGGAGGCAA CCCCCGGGAC
ACGCGCGTGT ACGTGGACGG CGAGGAGGTC CCGCAGGTCT TCCACTTCGG CGGCCTCACC
AGCGTCTACT CGTCCGAGCT CCTGAAGGAC GTGGAGTTCG AGGCGGGGAA CTTCGGCGTC
CGCTCCGGGC GGGCGATCGG CGGCCGCGTG AACCTCGTCA CCCGGGATCC CGGCGAGCGG
GCCCACGCGC TCGCCGACGT GAACCTCTAC CACGCGACCG CGCTCTACGA GGGCCGGCCG
TCCGAGGATC TGGGCATCGC GATCGCGGCG CGGCGCTCCT ACGCCGACGC GGTGGTGACC
CGCGCGGTCG AGTCCATGGA CGACCCGCCC GGCGTGAGCA CCGCGCCCCG CTACTACGAC
CTGCAGGCGA AGGCCGCGTG GAAGGCGACC GCCGACGACA CCGTCCGCCT GGACGTGTTC
GGCTCGGACG ACCGGATGGT CCTGACCGGC GTCGAGGACG ACCAGTCGCT CGAGGACATG
GACTTCCTCG AGTTCGGCAC CCGCTTCTAC CGGGCCGGGC TCCGCTGGGA TCACCGCGCC
GGCGAGGCGA CCCGGCTCCG CCTCGCGCTC GGCGGCGGCT GGCAGGACGT GGACGTCGAC
GCGGACGAGC GGTTCCGGAT GCGGCAGGAG CTCTGGAGCA CCCACCTCCG CGCGGAGGTC
CATCACGAGC TCGCGCCGCG GGTGAAGCTC GTCACGGGCG TCGACGGGCA GTGGTACCCG
AAGGTCCGGA TCGAGGTGGA CGCGCCGCCG ATCCCTCCGC CGGGCCAGAT CCTGAACCCG
AACGCCGAGA CCCGCCGCCT CGCCATGACC ATGGACGGGG TCGAGGCGGG CGCGTTCGTG
GAGGCCACCC TCGAGCCGGT CGACGGGCTC TTCGTCGTCC CCGGCGTCCG CGCCGACGTG
CACCGCGCGC TCGCGGACCT CTCCTGGGTG GACCCGCGCC TCGCCGTCCG CTGGCAGCTC
CGGCCCGAGA CCGCCCTGAA GGGCGCGGCC GGCCTCTACC ACCAGGCGCC GCCGCTGCCG
TACGTCACGG AGGAGTTCGG CAACCCCGAC CTCCACGAGG AGGGCGCCTG GCAGTACTCG
CTCGGCGCCG AGCAGCGGCT CCTGCCGCGG CTGCTCCTCG ACGTGCAGCT CTACTACAAG
CGGCTCTTCG ACCTCGCCCT CCCCTCCGAC GGGGTGATCA CGCGAGACGG TCAGCTCGTC
GCCGAGCGCT ACCGGAGCGC GGGCACGGGG CGCTCCTACG GCGCCGAGCT GCTCCTGCGC
TGGGACCCGG ACGGCCGCTT CTTCGGCTGG GTCTCCTACT CGCTCTCGCG CGCGGAGCGG
GGCGAGCCCG CCGCGGCGGG GAGCCGGCTC GAGAGCGAGG GGGACGCCTA CGATCAGCCT
CACAACGTGG TCGCGGTGGG AACCCTCGAG CTGCCCGAGC TCTGGCACGG CCTCTCCGCC
GGGTTCCGCG CCCGCTTCAC GAGCGGCAGC CCGTACGAGC CCATCCGCGG CGCCGTGTAC
GACGCCGACG CGGATCGTTA CGAGCCCATC CAGACCGGTG AGCTGTCGGG CCGCATGCCC
CCCTTCTTCC AGCTCGACCT CCGCGTCGAC AAGAAGTGGA CGTCCCGCAC CTGGACCTTC
GCGGCCTACC TCGAGGTCCA GAACGTCACC AACCGCGAGA ACCCCGAGGC CGTCGCCTAC
AGCTTCGATT ACTCGCAGCG CGGCTGGTAC TCCGGCCTCC CGCTCTTCCC CTCCTTCGGC
CTCCGCGCCG AGTACTAG
|
|---|
| Protein sequence | MRRPPIVLLS LLGLAVVAAG AAPALARGQP QETGVLTRAP EVIQPVEPEY PEAARAAGLT
GVVMLEVEIS ETGEVTDAVV TGPAGQGFDE AALAAARKLR FSPAEIDGAP APVRIEYRFT
FSLSAPPAAP APPPVNLLGR VLERGTRLPV AGAMVEAGGQ LTHTDGDGRF ALAGVADGAV
QVVVTDVDHV RLDSTETIEP GNATQVTYWL QKTAAQGEYE AVVVGEREEK QVSHVAIAAG
EIRRVAGASG DAVKVIQNLP GMARSFLSGE LIVRGGNPRD TRVYVDGEEV PQVFHFGGLT
SVYSSELLKD VEFEAGNFGV RSGRAIGGRV NLVTRDPGER AHALADVNLY HATALYEGRP
SEDLGIAIAA RRSYADAVVT RAVESMDDPP GVSTAPRYYD LQAKAAWKAT ADDTVRLDVF
GSDDRMVLTG VEDDQSLEDM DFLEFGTRFY RAGLRWDHRA GEATRLRLAL GGGWQDVDVD
ADERFRMRQE LWSTHLRAEV HHELAPRVKL VTGVDGQWYP KVRIEVDAPP IPPPGQILNP
NAETRRLAMT MDGVEAGAFV EATLEPVDGL FVVPGVRADV HRALADLSWV DPRLAVRWQL
RPETALKGAA GLYHQAPPLP YVTEEFGNPD LHEEGAWQYS LGAEQRLLPR LLLDVQLYYK
RLFDLALPSD GVITRDGQLV AERYRSAGTG RSYGAELLLR WDPDGRFFGW VSYSLSRAER
GEPAAAGSRL ESEGDAYDQP HNVVAVGTLE LPELWHGLSA GFRARFTSGS PYEPIRGAVY
DADADRYEPI QTGELSGRMP PFFQLDLRVD KKWTSRTWTF AAYLEVQNVT NRENPEAVAY
SFDYSQRGWY SGLPLFPSFG LRAEY
|
|---|
| |