Gene Anae109_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0839 
Symbol 
ID5375759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp953051 
End bp953902 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content72% 
IMG OID640842348 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001378034 
Protein GI153003709 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.378315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC ACGACACCGA GCTCCTCGAA CGCGCCCGCG CGGGCGACCG GCGGGCGCTG 
GAGGCGCTCC TGGCACGGCA TCAACGGAGC GTGTACCGCT TCGGCCTGAA GATGTGCCGT
GACGAGGAGG ACGCAAAGGA TATTTTGCAG GAGACCCTGC TGGCGGTCGC ACGGAACGTG
AAAGACTTCC GCGGCGCCTC CTCCGTGTCG ACGTGGCTCT ACACGATCGC GCGGAGCTTC
TGCATCAAGA AGCGGCGGCG CTCCAAGTTC GCCCCGGAGC AGGAGGAGTC GCTCGACGCG
CGCGAGCCGG GAGAGGCGGC GCTGCAGATC GTCGACCCCG GTCGACCGCC CGACGACGCG
CTCGCCGGTC GCCAGATCGA GGTCGCGCTC GAGCAGGCCA TCGGCTCCCT CGATCCCATG
TACCGCGAGG TGCTCGTCCT GCGGGACGTC GAGGGGCTCA CCGCGCCCGA GGTGGCGGAG
GTGATGGGAC TGTCCGTCGA GGCGGTGAAG AGCCGCCTGC ATCGCGCGCG GGTGGCGGTG
CGCGCGGCCG TGGCGCCCCT CCTCGGGATC CCGGGTGCGG AGGCCCCCGC GCCCGCCCCC
GCGACGCCGG CGGCGGAGCC CTGCCCGGAC ATCGTCGAGC TGTTCTCGAA GCACCTCGAG
GGCGAGATCA GCGCCACGCT GTGCGCCGAC ATGGAGCGTC ACCTCGCCCG CTGCCCGGCG
TGCGACGCGC GCTGCCAGTC GCTCCAGAGG ACGCTCGCGC TCTGCAAGGC CGCCCCGCTC
CCGGAGGTCC CGGCGCACGT CCAGTCGTCC ATCCGGGAGG CGCTGAAGGA GTTCGTCGCG
CTCCGCAGCT AG
 
Protein sequence
MDAHDTELLE RARAGDRRAL EALLARHQRS VYRFGLKMCR DEEDAKDILQ ETLLAVARNV 
KDFRGASSVS TWLYTIARSF CIKKRRRSKF APEQEESLDA REPGEAALQI VDPGRPPDDA
LAGRQIEVAL EQAIGSLDPM YREVLVLRDV EGLTAPEVAE VMGLSVEAVK SRLHRARVAV
RAAVAPLLGI PGAEAPAPAP ATPAAEPCPD IVELFSKHLE GEISATLCAD MERHLARCPA
CDARCQSLQR TLALCKAAPL PEVPAHVQSS IREALKEFVA LRS