Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_0730 |
Symbol | |
ID | 5376761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 827118 |
End bp | 829796 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640842240 |
Product | general secretion pathway protein D |
Protein accession | YP_001377927 |
Protein GI | 153003602 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.116775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.828359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACC GACTCGCCAC GCTCCTCGTC CTCCTGCCGT CCCTCGCGCT CGCGCAGGTC CCCGTCCGCC CGCCGGGCGC GGACGACACC GCGGGCCCGC GCCCGGTGCG GCCCGCGCCG CGCCCGCCCC CGCCCTCGGC CGCGCCCGGG GCGCCCCGCC CCGCGGCGCC GCCGGCCCCG CAGCAGCGCC CCGCCGCGCA GCCCCAGCCG CCTCAGCAGC CCGACCAGCC GCAGACGTTC CGCTCGGCGG AGCGCTGCGT CCCGCTGCGC GGGCGCTTCA TGCTGCAGTT CAACAAGGCC GAGATCGCCG ACGTCCTCGA GCAGGCGAGC CGCTGGACCT GCCGGAACTT CATGTTCACG GAGGACGTGG CGCGCGGGAA GATCACGCTG CTGTCGAAGA CGCCCGTCAC CGCCGAGGAG GCGTACTCGG CGTTCATCGC GGCGCTCAAC TCGAACAACA TCAGCGTCTA CCCGACGGGC AAGTACTACA AGCTCGTGCG GACGGCGGAC GCGAAGAAGA ACCCGATCCC CACCTACACG GGCGATCAGA CGACGCCCTA CAGCGAGCAG CCGATCACCA AGGTCATCCG GCTGAACTAC GCGGACGCGG ACCAGCTCCG CGGGATCATG GGGAACTTCA TCTCGCCCCA GGGCGCGGAC ATCCAGTCCA TCCCGCCCAA CATGCTCATC ATCACGGACA TCGCGCTGAA CATCCGCCGC ATCGAGCGGC TGATCGACGC GGTGGACCGC GCCGGCGCGG GCGAGCTCGT GCGCATCGTC CAGATCCGCT TCGCCTCCGC GAAGGACATC GCCGACAAGG TGAACCAGAT CTTCCAGGCG CAGCAGGGCA GCCGCGGCGG CGCGCGGCCG GGCGTGGGCG CGCCGCAGGT GCCGGCGCGC CCCAGGCCGG GCCAGCCCGC CGCGGCCGCG CCCGCCGGCC GTGACTCGGG GCAGATCTCC GTCTCCAAGG TCCTCGCCGA CGACCGCACG AACAAGCTCA TCGTCATCGC CGACGAGAAG AGCTTCGAGC GGCTCATGGA GCTCATCGAG CAGCTCGACG TGCCCACCAG CGCCGAGGGC GGCATCCACG TCGTGTTCCT CAAGAACGCG AACGCGGAGG AGCTCGCGCA GACCCTCTCG AACCTCGCCC AGGGCCAGGC GTCCGGGCGC CGGGCCACCA CGCCCGGCGC GCCCGCGGGC GGGCTCACGC CCACCCCGAT GCCGAGCCCC CTCGGAACGC AGCCCGGCGC GCCGCCGTCG GCCCGCCCGG GCGGCGCCTC CGACGTGACG GCGTCCCTCT TCTCGGGCGA CGTGAAGATC ACCGCCGACA AGCAGCAGAA CGCCCTGCTC GTCCAGGCGA GCGGCGCGGA CTTCCAGGCC ATCCAGCGGC TCGTCGAGAA GCTCGACCGC CCGCGGCGGC AGGTGTTCGT CGAGGCGGTG ATCATGGAGG TCAACCTCCG CGACGAGACG CAGTTCGGGG TGGGGGCGCA CGGCATCGTG CCGGTGGACT ACCGCGGCGA CGAGGGGTTC ATCCCGATCT CCTCGCAGCC GGGCCGCGTC TCCTCCTTCG ACGTCACGAG CGCCATCTCC CTCGGCGGGT TCCTGACGGG CCTGAACGGG CCGCCCTCGG GCGTGGTGGA GGATCTCCTC GGGATCAAGG TCCCTTCACT CGGGGTGATC GTCCAGGCGC TGCAGTCGAG CGCCGACGTG AACGTGCTCT CCACGCCGCA CATCCTCGCG TCCGACAACG AGGAGTCCGA GATCACGGTG GGGCAGAACG TGCCGTTCCA GGCGGGGTAC GCGCCGGCGG GGCTCGGGAA TTTGCTCACC GGGACGACGG CGACCACCTC GACGCTCGGG CTCGGCGGCC TCTCCTCCCT GGTCGCGCCC ATCCAGCGGC AGAACGTCGA GCTCCGGCTC AAGATCAAGC CGCAGATCAA CGAGGGCGGG AACATCCGGC TGACCATCGA GGAGCAGACC GAGGAGATCG TCGATCGCGA TCCCCAGCTC GGCCCCACCA CCGCGAAGCG CACGGCGAAG ACGCAGATCG TGGCGAAGGA CCAGAGCACC ATCGTCATCG GCGGGCTCAT CCAGGAGCGG AACGTCCGCA GCGTCCGCAA GATCCCGGTG CTCGGCAGCC TGCCCATCCT CGGCTGGCTG TTCCGCGACT CCACCAACAC GAAGCAGCGG ACGAACCTCC TCCTGTTCCT CACGCCGTAC ATCATCCGCG ACGAGACGGA CTACCGGCGC ATCTACGAGC GCAAGCGCAA GGAGCAGCAG GAGTTCGTGG AGCAGTTCTA CGGCCGGCAG CCGAGCTACC AGGTCGCCAT CGACTTCACG CGCAAGGCCG GCCCGTACGC GAAGTTCCGG GCGGGCATCC TCGAGGAGTC GCAGAAGCTC GAGAACGGCG GCACGGGCGC CCCCGGCGAG CGGCTCATCG TGCCGCCGAC CGGCGCCCCG CGGCGCGGCG ACGAGGAGGG CGCGCCGGGC GGGGAGCCGG AGGCGCAGGA CCTCGCGCCG GAGGAGGCGC CAGGCGGCGA CGTGGAGCAG CTCGAGGTGC AGCCGCAGGC GCCCGCGCCG GGGGAGGCCG CGCCGCCCGC GCCGCCCGCG CCACAGCCGG GCGAGGCGGC GCCGCCCGCC ACGCAGCCGG AGCCGGCGCC GCAGCCGCCG GGGGAATGA
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Protein sequence | MRNRLATLLV LLPSLALAQV PVRPPGADDT AGPRPVRPAP RPPPPSAAPG APRPAAPPAP QQRPAAQPQP PQQPDQPQTF RSAERCVPLR GRFMLQFNKA EIADVLEQAS RWTCRNFMFT EDVARGKITL LSKTPVTAEE AYSAFIAALN SNNISVYPTG KYYKLVRTAD AKKNPIPTYT GDQTTPYSEQ PITKVIRLNY ADADQLRGIM GNFISPQGAD IQSIPPNMLI ITDIALNIRR IERLIDAVDR AGAGELVRIV QIRFASAKDI ADKVNQIFQA QQGSRGGARP GVGAPQVPAR PRPGQPAAAA PAGRDSGQIS VSKVLADDRT NKLIVIADEK SFERLMELIE QLDVPTSAEG GIHVVFLKNA NAEELAQTLS NLAQGQASGR RATTPGAPAG GLTPTPMPSP LGTQPGAPPS ARPGGASDVT ASLFSGDVKI TADKQQNALL VQASGADFQA IQRLVEKLDR PRRQVFVEAV IMEVNLRDET QFGVGAHGIV PVDYRGDEGF IPISSQPGRV SSFDVTSAIS LGGFLTGLNG PPSGVVEDLL GIKVPSLGVI VQALQSSADV NVLSTPHILA SDNEESEITV GQNVPFQAGY APAGLGNLLT GTTATTSTLG LGGLSSLVAP IQRQNVELRL KIKPQINEGG NIRLTIEEQT EEIVDRDPQL GPTTAKRTAK TQIVAKDQST IVIGGLIQER NVRSVRKIPV LGSLPILGWL FRDSTNTKQR TNLLLFLTPY IIRDETDYRR IYERKRKEQQ EFVEQFYGRQ PSYQVAIDFT RKAGPYAKFR AGILEESQKL ENGGTGAPGE RLIVPPTGAP RRGDEEGAPG GEPEAQDLAP EEAPGGDVEQ LEVQPQAPAP GEAAPPAPPA PQPGEAAPPA TQPEPAPQPP GE
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