Gene Anae109_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0728 
Symbol 
ID5374775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp824055 
End bp825284 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content71% 
IMG OID640842238 
Productgeneral secretion pathway protein F 
Protein accessionYP_001377925 
Protein GI153003600 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID[TIGR02120] general secretion pathway protein F 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.164597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.206561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCT TCCAGTACAA GGCGCTCAAC GCCGCCGGCA AGGCGGTCCA GGGGCTCAAG 
GAGGCGGACT CGCCGAGGAC GCTCCGCGCG AACCTGCGCC GCGAGGGCGT GTTCCTCACC
GAGGTGATCG GCGAGGCGCA GGCGAAGGCG CAGGCCAAGC GCGAGGTGAA CGTCCGGCGC
TGGATGCTCG GGCGCGTCGG CGCGCGCGAT CTCGCCGTCG CGACCCGCCA GCTCGCGGTG
CTCGCCCACG CCGGCATCCC GCTCGTGGAG GCGCTCACCG CGCTCGTCGA CCAGGTCGAG
CACGAGCGCC TGAAGCGCGT GCTGGGCGAC GTGAAGCAGC GGGTCAACGA GGGCAGCGCG
CTCGCCGACG CGCTCGCCGC GCACCCCCGC GTCTTCTCGA CGCTGTACGT GAACATGATC
CGGGCGGGGG AGTCGTCGGG CGCGCTCGAG ATCGTCCTCG TGCGGCTCGC CGACTTCACC
GAGAGCCAGG CGCGGCTCCG CTCCAAGATC GCCGGCACGA TGGCCTACCC CATCGCGATG
ATGGTGATCG GGACGCTCAT CATGGGCATC CTCTTCACCG TCGTGATCCC CAAGATCACG
CAGATCTTCG ACAACACCAA CGCGACCCTC CCCTGGTACA CGGCGGTGAC GATCGGCATC
TCGTCGTTCG CGGCGCGCTG GTGGTGGGCC ATCCTGCTCG CCGTCGCGGC CACCGGGTAC
GGCCTCGCCC GCTGGCGGCG GACGCCGGCG GGGCGCGGCG CCTGGGACCG CGCCGTGCTG
CGCGCCCCCA TCCTCGGGCC CATCGTCCGC CAGGTCGCCA TCGGGCGGTT CGCGCGGACG
CTCTCGACGC TGCTCAAGAG CGGCGTCCCC CTGCTCACCG CGATGGACAT CGTGAAGAAC
ATCCTCGGGA ACGTGCGGCT CGCGGAGGTG GTCGAGCAGG CCCGCGACGC GATCCGCGAG
GGCGAGTCCA TCGCCGCGCC CCTGAAGCGC TCCGGGGAGT TCCCGCCGCT CGTGTACCAC
ATGGTCGCCA TCGGCGAGCG CTCGGGCGCG CTCGAGGAGA TGCTCGCCAA CGTCGCCGAC
GCCTACGAGG ACCAGGTCGA GACCACCATC GCCGCGCTCA CGTCCCTGCT CGAGCCGGTG
ATGATCGTCG CGATGGGCGG CGTCGTCGCG TTCATCGTGT TCTCGGTCCT CATGCCGATC
CTCCAGATCA ACAACCTCGC AGGAGGCTGA
 
Protein sequence
MPVFQYKALN AAGKAVQGLK EADSPRTLRA NLRREGVFLT EVIGEAQAKA QAKREVNVRR 
WMLGRVGARD LAVATRQLAV LAHAGIPLVE ALTALVDQVE HERLKRVLGD VKQRVNEGSA
LADALAAHPR VFSTLYVNMI RAGESSGALE IVLVRLADFT ESQARLRSKI AGTMAYPIAM
MVIGTLIMGI LFTVVIPKIT QIFDNTNATL PWYTAVTIGI SSFAARWWWA ILLAVAATGY
GLARWRRTPA GRGAWDRAVL RAPILGPIVR QVAIGRFART LSTLLKSGVP LLTAMDIVKN
ILGNVRLAEV VEQARDAIRE GESIAAPLKR SGEFPPLVYH MVAIGERSGA LEEMLANVAD
AYEDQVETTI AALTSLLEPV MIVAMGGVVA FIVFSVLMPI LQINNLAGG