Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_0687 |
Symbol | |
ID | 5374304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 775336 |
End bp | 775917 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640842197 |
Product | fimbrial assembly family protein |
Protein accession | YP_001377884 |
Protein GI | 153003559 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.580154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCCGCA TCAACCTCCT CCCGGTCCGC GTCTCCAAGA AGAAGGAGGC CGGCAAGCAG CAGCTGATCC TCTTCGCGCT CGTGCTGGTG CTCGGCGTCG TCGTGAACTA CCTGTGGGCC GCCTCTCGCG CCGACGCGCT CGCCACGAAG CAGGCGGCGG TGAAGCGGAC CAAGGACGAG ATCGCCCAGC TCGATCGCAT CATCGGCGAG GTGAAGAACA TCAAGGAGCA ACAGGCACAG CTCAGGGAGA AGCTCGAGGT GCTCGCGCAG CTGAAGACCG CGCGCACCGG ACCGGTGAAG ATGCTCGACG AGCTCGCCAC GCTCACCCCG AAGCGGCTCT GGCTGCGGAA GCTGGAGGAG AAGGGCGGGG CGGTCACGAT CGACGGGACC GCCTCGACGA TCGACGACGT CTCGGAGCTC ATGACGGCCC TCGGCGGATC CACGCAGTTC CGCAACGTCG AGCTGAAGAA GACCGCCTCG AAGACCGATG GTGGATTCCG GACCGTGGAC TTCACGCTCA CGGCGACCGT CGCGTATGCC GCCAAGCCCG CCTCCGGCCC CGCGGCCGGA AAGAAGGGGT AG
|
Protein sequence | MVRINLLPVR VSKKKEAGKQ QLILFALVLV LGVVVNYLWA ASRADALATK QAAVKRTKDE IAQLDRIIGE VKNIKEQQAQ LREKLEVLAQ LKTARTGPVK MLDELATLTP KRLWLRKLEE KGGAVTIDGT ASTIDDVSEL MTALGGSTQF RNVELKKTAS KTDGGFRTVD FTLTATVAYA AKPASGPAAG KKG
|
| |