Gene Anae109_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0584 
Symbol 
ID5376072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp665389 
End bp665880 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content71% 
IMG OID640842092 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001377782 
Protein GI153003457 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCTGG ACGAGGCGGC GGCTGCCCGG CTGTACCGGA CGTACGGACC CGCCGTCTAC 
AGACGTTGCC TGCGCCTCCT TCGCGATCGC GAGCTCGCCC GCGACGCGAC GCAGGACGTC
TTCGTCCAGC TCCTCCGTCA ATGGACCGAC TCGACGAAGC CGGAGGTGGT TCTGCACTGG
ATCTACCGGG TCGCCACCAA CCACTGCCTC AACCTGCTCC GCAACGCGCG ACGGCACGGC
GAACAGCCGC TGGAGCTCTG CCCGGTCCAC GCCGTGCCGG GCTCTCCGGC CGAGCCGCAG
CGGCTCGTCG CGCAGCAGGT GCTGTCGCGG TTCGACGCGG TGACGCAGGC CGTGGCGGTG
GGTGTGTTCG TGGACGGGAT GGAGCACGAG GAACTCGCGC GCGCCCTCGG CATCTCCCGG
CGGACGGTCA GCCGCCGGCT CGACCGTTTC GTGGAGTCGG CGCGGGAGTA CCTGGCCCGA
GGTGAAGGAT GA
 
Protein sequence
MPLDEAAAAR LYRTYGPAVY RRCLRLLRDR ELARDATQDV FVQLLRQWTD STKPEVVLHW 
IYRVATNHCL NLLRNARRHG EQPLELCPVH AVPGSPAEPQ RLVAQQVLSR FDAVTQAVAV
GVFVDGMEHE ELARALGISR RTVSRRLDRF VESAREYLAR GEG