Gene Anae109_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0569 
Symbol 
ID5375365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp651135 
End bp652280 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content74% 
IMG OID640842077 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001377767 
Protein GI153003442 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC ACCTCTCGAC CTCCCTCGTA CTCGGGCTGG CGCTCCTCTC CGCGTGTGGC 
CAGAAGTCCG GGGCCAAGGC GTCCGGCGGC CCGGTGGAGG TCGGCGTCGT GACGCTCGCG
CCCACGTCGG TGACGCTCAC GAAGGAGCTG CCGGGCCGCA CGTCCGCGTT CCGCGTGGCG
GAGGTGCGGG CCCGCGTCAA CGGGATCGTC CAGAAGCGGC TCTTCACCGA GGGCGCCGAC
GTCAAGGCCG GGCAGCCCCT CTTCGTCATC GATCCTGCGC AGTACCAGGC GTCGCTGGAG
GGAGCGAAGG CGCAGCTCGC CCGCGCCGAG GCGAGGGTCG CGTCGGCCCG GATGCAGGCG
CAGCGGTACA CCGAGCTCGT CGCCGAGAAC GCGGTGAGCA AGCAGGAGGC CGACGACGCG
GTGGCCGCGC TGAAGGCGGC GGAGGCGGAC GTCGCGGCCG GGCGCGCCGC CGTGCAGACC
GCGCGGATCA ACCTGGGCTA CACCACCGTC ACCTCTCCGC TCACCGGGCG CATCGGCCGC
TCCGCGGTGA CGGAGGGCGC CTACGTCCAG CAGGGCCAGG CGACGCTGCT CGCGACCGTG
CAGCAGCTCG ACCCCGTCTA CGTGGATCTC ACGCAGTCGA GCACCGAGGC GCTGCGGCTG
CGGCGCGACC ACGCCGAGGG CAAGCTGCAG CGCGCCGGCC AGGGGCAGGC GAAGGTGCAG
CTCGTGCTCG AGGACGGCCG GCCCTACGGG CTGGACGGGA CGCTGCAGTT CGCGGACGTC
ACGGTCGATC CGAGCACGGG CTCGATCGGG CTGCGCGCGC TGTTCCCGAA CCCGCGCGGC
GAGCTCCTGC CGGGCATGTT CGTGCGCGCG CGGCTGCAGG AGGGGGTGAA CCCGGAGGCC
CTGCTCGTGC CGCAGCAGGC GGTCGCGCGC GACCAGAAGG GGCAGCCCAC CGCGCTCGTG
GTCAACGCGG AGCGGAAGGT CGAGCGCCGG CAGCTCGTCA CGGATCGCGC CATCGGCGAC
GCCTGGCTCG TGACCTCCGG GCTCTCCCGC GGGGAGCAGG TGATCGTGGA GGGGCTGCAG
AAGGTCCGGC CCGGCGCGGA GGTGAAGCCC GTCCCGGTGG CCGGCCCGAA GCACGCCGTC
CGCTGA
 
Protein sequence
MSTHLSTSLV LGLALLSACG QKSGAKASGG PVEVGVVTLA PTSVTLTKEL PGRTSAFRVA 
EVRARVNGIV QKRLFTEGAD VKAGQPLFVI DPAQYQASLE GAKAQLARAE ARVASARMQA
QRYTELVAEN AVSKQEADDA VAALKAAEAD VAAGRAAVQT ARINLGYTTV TSPLTGRIGR
SAVTEGAYVQ QGQATLLATV QQLDPVYVDL TQSSTEALRL RRDHAEGKLQ RAGQGQAKVQ
LVLEDGRPYG LDGTLQFADV TVDPSTGSIG LRALFPNPRG ELLPGMFVRA RLQEGVNPEA
LLVPQQAVAR DQKGQPTALV VNAERKVERR QLVTDRAIGD AWLVTSGLSR GEQVIVEGLQ
KVRPGAEVKP VPVAGPKHAV R