Gene Anae109_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0558 
Symbol 
ID5374085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp637448 
End bp638602 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content77% 
IMG OID640842066 
Productmajor facilitator transporter 
Protein accessionYP_001377756 
Protein GI153003431 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.257784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTG AGCGCCTCGC GCTGTACGCA GGGACGGTCG CCGCCTACTC GGACATGTAC 
GTGACGCAGC CGATCCTCCC GCTGCTCTCG GGGGAGTTCG GCGTCGGGCC CGCACGGGCG
GGGCTCACCG TCTCCGCGGT GGTCCTCGCC ATCGCGGTCG CGTCGAGCCT CTACGGACCG
CTCTCCGACG CGCTCGGGCG CCGCCGCGTC ATGGCCGGCG CCACCGCGCT CCTCTCGCTC
GCGACGCTCG CCTGCGCCGC GGCGCCGTCC TTCGGCGCGC TCGTCGCGCT CCGGGCCGCT
CAGGGGGCGC TCGTGCCGGG CATGACGGCC GTGTCCATCG CGTACGCGGG AGACCGCTTT
CCTCCGGGCG AGCTCGGGCG CGTGGTCGGC GGCATCATCG CCGCCTCGGT GGTGGGAGGG
CTCGTCGGGC GCGTGGCCTC GGGCGCGATC GCGGCGCACC TCGGCTGGCG CGCGGCGTTC
GTGGCGTTCG CGGGCCTCAC GCTCGCGGCC GCGGTGGTGC TCGCGCGCGG GCTCGCGCCG
GGGACGCGCG CGGCCCGGCA CGGGCTCGTC GCGGCCTACG CCGGGATGCT GCGCCACCTG
CGCGATCCGC GCCTCGTGGG CGCCTACCTC GTCGGCCTCT CCCTGTTCTT CGGCTGGATC
GGGATCTTCA CGTACCTGCC GTACCGCCTG TCCGCGCCGC CCTACGCGCT CTCCACCGGG
GCGGTGTCGA GCGTCTACCT CGTCTACGCC GCCGGGGTGG TGGCCTCGCC GCTCGCGGGC
AGGCTCTCGG GCCGCGTGCC GCCGCGGCGC CTCATCGCCG TCGGGCTCGC GGGCGAGGGG
CTCGGGATGG CGCTCGCCCT GGCGGGCCCG CTGCCGCTCG TCGTGCTCGG CCTCGTGGTG
CTGGTGCTCG GCACGTTCAC GGCGCAGGCG GTGGTCCCGG CCTTCGTGAA CGCCACCGCG
CGCACCGCCA AGGGCGGCGC GAGCGCGCTC TACCTCGCCT TCTACTACCT GGGCGGCACG
CTCGGGTCGG CGCTGCCGGG CCTGGCGTGG CAGGCCGGGG GCTGGCCGGC GGTCGTGGCC
GCGTGCGGCG CCTCGGTGTG CGTCGGGATC GTCGCGAACG CCGCGCTGTG CGGGCGCGCC
GCCCGGACTG GCTGA
 
Protein sequence
MDRERLALYA GTVAAYSDMY VTQPILPLLS GEFGVGPARA GLTVSAVVLA IAVASSLYGP 
LSDALGRRRV MAGATALLSL ATLACAAAPS FGALVALRAA QGALVPGMTA VSIAYAGDRF
PPGELGRVVG GIIAASVVGG LVGRVASGAI AAHLGWRAAF VAFAGLTLAA AVVLARGLAP
GTRAARHGLV AAYAGMLRHL RDPRLVGAYL VGLSLFFGWI GIFTYLPYRL SAPPYALSTG
AVSSVYLVYA AGVVASPLAG RLSGRVPPRR LIAVGLAGEG LGMALALAGP LPLVVLGLVV
LVLGTFTAQA VVPAFVNATA RTAKGGASAL YLAFYYLGGT LGSALPGLAW QAGGWPAVVA
ACGASVCVGI VANAALCGRA ARTG