| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0535 |
|---|
| Symbol | |
|---|
| ID | 5375703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 608606 |
|---|
| End bp | 610810 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640842043 |
|---|
| Product | fimbrial biogenesis outer membrane usher protein |
|---|
| Protein accession | YP_001377733 |
|---|
| Protein GI | 153003408 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3188] P pilus assembly protein, porin PapC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGGG TGCCCGGCGA CACCGCCCTC GTGCTGATCG CGCCGCGGGA CGCCTGGATC
TCTCCAGCGG ACCTCGCCCG CACCGGCCTG TCCGGCATCG GGGGCGCGCG CCGCGAGCTC
GACGGCCGCA CACTCGTGTC GCTCCGCTCG CTCGCCCCGG ACGTCCGCTT CGAGCTGGAC
GAGCGCGAGC TCGCCCTGCG GCTCGAGGCC GCCCCGAGCC TGCTCGGGCG CGGCGCGGTG
GATCTCCGCG CGTGGAGCCG CCCCGCGGGC ATCGAGACCG GCGACGCGCC CAGCGCGTTC
CTCAACTACG CCGCCCACGC CACGACGCAG GAGGACGCGT CCGGCTTCCT CGAGGCGGGC
GTCTCGCGCG ACGCGGCGCT CCTCACCGGC TCCGTGTCGG CCACGCAGGT GGCCGGCGTC
GTCCGCGGGC TCACCACGCT GACGCTCGAT CGACCGGAGC GGCTCCTGCG CCTCACGGCG
GGCGACGCGC TCGTCGCCCC GGACGCCCTC TCCGGCGCGC CCATGCTCGC CGGCATCGGG
ATCGCGCGCG AGTGGTCGCT CGACCCGTAC CGCGTGCGCG CCCCGCTCCC CGGCGCCACC
GCCTTCGCCG CGACGCCCTC CACCGTGGAC GTGTACGTGA ACGGGGCCCT CGCGCGCAGC
CTGCCGGTCG CCCCCGGGAC CTACGACCTC TCGAACCTCC CCGTCACGAC CGGCGCGAAC
GACGTGCGCC TCGTGGTGCG GGACGCGTTC GGGCGCACGC AGGCGATCGA GGCCGCGCAC
TACCAGGCGC AGGGCCTGCT CGCCCCAGGC CTCGACGAGC TGGGCTGGTG GGCGGGGGCG
CTGCGCGAGC GGTACGGGAC GGAGAGCTTC TCCTACGGCG ATCCCGTCCT CATCGGACGA
CACCGGCGCG GCTTCAGCGA CCGGCTGACC GGGGGCGCCC GGCTCGAGCT CGGCCCGCGC
GTGCAGCAGG CCGGCGCCTC CGTCACGGTC GGCTCGGGGG CGGGGGAGCT GGAGGCGGCC
GCGGCGGCGA GCGCCGACGA GGGCGCGCCC GGCGCGGCCG GCTTCCTCGC CTGGCGCTAC
TCCGCGCGCC GCTTCGCGCT CGGCGCGGAC GCGTCCGTCC TCTCGAGCCG CTTCGCCCAC
GCGACCCTCG CGGCGGGCGC CGACCGCGCC CTCTGGCGGG CCGGAGCGCA CGTCGCGGCG
CCGCTCGGTC GTGTCGCGAG CGTCGAGCTC CAGTACGTCG GGGCCGAGCA GCGCGACGCG
GGCGCGAGCC ACCGCGTCGA GGCGCGCACC TCGCTGCGCG TGGGCGGCGG CGCGTGGCTG
CAGCTCTCCG CCTCGGTCAG CCGGGATCGC GCCGCGGACC CGGCCGCCGC GGTGTTCGCC
CAGCTCGTCA TGGCCGCGCC CGGAGGCGGG ACGCTCGACG CGGGCGTTCG CTCCGGGCGC
GCCGGGACGA GCGCGAGCAC GGGCCTCCAG CGCACGCTGC CCGTCGGTCC CGGCGTCGGC
TATCGCCTGC GCGCGGACTC GGCGGCGGGG GGAACGGTGA GCGCCCTGGC GCAGGCGCAG
CCGGAGTTCG GACGGTACGA GCTCGGCTAC GATCACGGGC GCGGGAGCGA GGTCGGCTCT
GCGTCGGCCT CGGGAGGGCT CGTCCTGGTC GGGCGGCGCC TCTTCGCGAC GCGCCCCGTC
GAGCAGGGCT TCGCCCTCCT TCGCGTCCCG GGCGTGCCGG GCGTGCGGGC CTATCTCGAC
CGCCGTCCCG TGGGGCGCAC CGACGCGCGA GGCGACCTGC TCGTGCCGGG CCTCCTCCCC
TACTACGGCA ACCGGCTCGG CATCGAGGAC GCCGACGTCC CCGCGAGCTA CCGCATCGGT
GACACCGAGC GGCTCGTGGC CTCGCGGCCG CGCGGCGCGG CGGTGGTGCG GTTCGACGTG
GAGCGGCTGC GGGCGGTGGA GGGTTGGCTG CGCCTCGCGC GCCGCGAGGG CGCCGTCGTC
CCCGCCTACG GCACGTTCGA GCTCGACCTC CCCGGCGGCA CGCGGCGCTC TCCGGTCGGC
GCGGACGGCG CGTTCTGGCT CGAGGACGTG CCCGCGGGAG AGCACGCGGC GCGCGTCTAC
TGGAACGGCG AGGTCTGCGA GCTGCCGCTC GCCGTCCCGG AGAGCGGCGC GGGCGTGCTC
GAGCTCGGCA CCGTCACCTG CGGGCCACGC GCGCCGATGC TCTGA
|
|---|
| Protein sequence | MNGVPGDTAL VLIAPRDAWI SPADLARTGL SGIGGARREL DGRTLVSLRS LAPDVRFELD
ERELALRLEA APSLLGRGAV DLRAWSRPAG IETGDAPSAF LNYAAHATTQ EDASGFLEAG
VSRDAALLTG SVSATQVAGV VRGLTTLTLD RPERLLRLTA GDALVAPDAL SGAPMLAGIG
IAREWSLDPY RVRAPLPGAT AFAATPSTVD VYVNGALARS LPVAPGTYDL SNLPVTTGAN
DVRLVVRDAF GRTQAIEAAH YQAQGLLAPG LDELGWWAGA LRERYGTESF SYGDPVLIGR
HRRGFSDRLT GGARLELGPR VQQAGASVTV GSGAGELEAA AAASADEGAP GAAGFLAWRY
SARRFALGAD ASVLSSRFAH ATLAAGADRA LWRAGAHVAA PLGRVASVEL QYVGAEQRDA
GASHRVEART SLRVGGGAWL QLSASVSRDR AADPAAAVFA QLVMAAPGGG TLDAGVRSGR
AGTSASTGLQ RTLPVGPGVG YRLRADSAAG GTVSALAQAQ PEFGRYELGY DHGRGSEVGS
ASASGGLVLV GRRLFATRPV EQGFALLRVP GVPGVRAYLD RRPVGRTDAR GDLLVPGLLP
YYGNRLGIED ADVPASYRIG DTERLVASRP RGAAVVRFDV ERLRAVEGWL RLARREGAVV
PAYGTFELDL PGGTRRSPVG ADGAFWLEDV PAGEHAARVY WNGEVCELPL AVPESGAGVL
ELGTVTCGPR APML
|
|---|
| |