| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0516 |
|---|
| Symbol | |
|---|
| ID | 5376344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 582760 |
|---|
| End bp | 583899 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640842024 |
|---|
| Product | hydrogenase formation HypD protein |
|---|
| Protein accession | YP_001377714 |
|---|
| Protein GI | 153003389 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0409] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.646175 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCA AGGATCTCTT CCAGGAGCTG AAGTTCCGGG ACCCGGTGCG CGCGCGCGCC
CTCGCGGAGG CCATCGCCCG AGAGGTCGAC GCCATCGGCC GGACGGTGCC GGTGATGCAC
GTCTGCGGCA GCCACGAGCA GGCGATCGCG CGCTTCGGGC TGCGCGCGGT GTTGCCGCCC
GGCCTCGAGC TCATCATGGG CCCGGGCTGT CCGGTGTGCG TGACCGACGG CCCCGAGGTG
GACGAGGCCG TCGCGCTCGC CCTCCAGGGC GCGCGCGTCT GCACCTACGG CGACATGCTG
CGCCTCCCCG GCACGGCGCG GTCGCTCGCC GATGCCCAGG CGGACGGCGC GAAGGTCGAG
GTCGTCTACT CCGTCTCGCA GGCGGTCGAG CTCGCCCAGA AGCACCCGGA GGACGAGGTG
GTCTTCCTGG GCTCGGGCTT CGAGACCACC GCGGTGGCCA CCGCGGCCGT GGCGCTCGCG
AGCCCGCCGA AGAACTTCTC CATCCTCTCG GTGCACAAGT ACGTGCCCGC GGCGATGAAC
GTCGTCGCCG AGAGCCCGCA GACGAACATC GAGGGCTACA TCGCGGCGGG GCACGCCGCC
ATCATCACGG GCTGGGGGAT CTTCGAGCCG TTCGCCGCCC GCACCGGCAA GCCGGTGGTG
GTGGCCGGCT TCGAGCCGCT CGACATCCTC GCCGCCATCC TCCAGCTCGT GGAGCTCATG
CGGCAGGGGA AGGCGGAGGT CGCGAACGTC TACCCGCGCT GCGTGACCAA GGAGGGGAAC
CTCCCCGCCC AGCGCAGCCT GTGGAAGGTG TTCCGTCCCG TGACCGGCAC GTGGCGCGGC
ATCGCCGAGG TCCGCGACGG GAACCTGGAC CTCAGGCCCG AGTACGCGCA CCTCGACGCG
CGCAAGCGCT TCCGGATCGA CACGGCGCCC GTGCGCGACG AGGACGCCGA GGAAGCGGCG
AAGGGCTGCA TCTGCGGCTC GATCATGCTC GGCCTCGCGA ACCCGGGCGA CTGCGCGCTC
TTCGGGAAGA CCTGCGTCCC GGAGTCGCCG GTGGGCGCTT GCATGGTGTC GTCGGAGGGG
CAGTGCCGCA TCTGGCACAC CTACGGCGGC GTCCCGGATC TCAGGAAGGT CGGAACCTAG
|
|---|
| Protein sequence | MAGKDLFQEL KFRDPVRARA LAEAIAREVD AIGRTVPVMH VCGSHEQAIA RFGLRAVLPP
GLELIMGPGC PVCVTDGPEV DEAVALALQG ARVCTYGDML RLPGTARSLA DAQADGAKVE
VVYSVSQAVE LAQKHPEDEV VFLGSGFETT AVATAAVALA SPPKNFSILS VHKYVPAAMN
VVAESPQTNI EGYIAAGHAA IITGWGIFEP FAARTGKPVV VAGFEPLDIL AAILQLVELM
RQGKAEVANV YPRCVTKEGN LPAQRSLWKV FRPVTGTWRG IAEVRDGNLD LRPEYAHLDA
RKRFRIDTAP VRDEDAEEAA KGCICGSIML GLANPGDCAL FGKTCVPESP VGACMVSSEG
QCRIWHTYGG VPDLRKVGT
|
|---|
| |