Gene Anae109_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0378 
Symbol 
ID5376284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp430322 
End bp431083 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID640841887 
Productglycosyl transferase family protein 
Protein accessionYP_001377577 
Protein GI153003252 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3306] Glycosyltransferase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.166362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0272961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCCCT CGTTCGACCT CCTCAACCGA ACGTTCGACC GCATCTTCGT CGTGACCCTG 
CCTCGCGCCC TCGAGAGGCA GGCCCGCGTC ACGTCCCGCC TCACGGGGCT CGACTATCGG
TTCTTCCACG GCTTCGATCG CCAGCAGCTC GACCTCGATC GGCTCGCGCG CGAGGGCGTC
TACGCGCCAG AGCGCGCCCG GAGGGTGGAT CGTCACGGCA GGGCCCTGGG CGCCGGCCAG
GTCGGGTGCT CTCTCTCCCA TCGGAAGCTC TACGAGCAGG CGATCGAGAA CGGCTGGAGC
CGCGTGCTCG TCCTGGAGGA CGACGTCGTC GCGCGCGACG ACGACCTTCC TCAGCTCACG
GCGGCGCTCT CGCAGCTGCC CGAGGCGTGG GACGTCCTGT ACCTCGGCTA CACCAACTTC
GAGACGGTCA CCAGGCGCGA CCGCGTGAAG CAGGCGAGCT ACGTCGTGCT CTCGGCGCTG
CGGCTCATGA AGTGGAGGCC GCGAGAGATC CTGCGCTTTC ACCCGAGACC CTTCTCGCCG
AATCTTCGCT GCGCCGGGCT GCACCACTGC ACTCACGCAT ACGCCTTCAC CCTCGCGGGA
GCGAAGAAGC TCCTCGCGGC GCAGACGCCG GTCGCCTTCC CCGCCGACCA GCTCCTCGTG
CACCTCGTGC TTCGCGGAGA GATCCGCGCG TTCGTCACCG AGCCGAAGTT CTTCGACCAG
GAGGCCCCGC CGGGCGGAGT GGGCTCGTTC GTCGCAGCCT GA
 
Protein sequence
MHPSFDLLNR TFDRIFVVTL PRALERQARV TSRLTGLDYR FFHGFDRQQL DLDRLAREGV 
YAPERARRVD RHGRALGAGQ VGCSLSHRKL YEQAIENGWS RVLVLEDDVV ARDDDLPQLT
AALSQLPEAW DVLYLGYTNF ETVTRRDRVK QASYVVLSAL RLMKWRPREI LRFHPRPFSP
NLRCAGLHHC THAYAFTLAG AKKLLAAQTP VAFPADQLLV HLVLRGEIRA FVTEPKFFDQ
EAPPGGVGSF VAA