Gene Anae109_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0332 
Symbol 
ID5377290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp385218 
End bp386969 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content72% 
IMG OID640841841 
ProductOPT family oligopeptide transporter 
Protein accessionYP_001377531 
Protein GI153003206 
COG category[S] Function unknown 
COG ID[COG1297] Predicted membrane protein 
TIGRFAM ID[TIGR00728] oligopeptide transporters, OPT superfamily 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00861331 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAGC TCTCTCCCTC GACCGACCTC CCGAACCTCG TGGCGCCGAA GCGCGAGCTC 
ACCGCCCGCG CGGTGGCCAT CGCGATCCTC GTCGCCGCGC TGATGGGCGC CGCGGAGCCG
ACGGTGGTCC TGCGCATCGG CTACGGGCCG AACATGTCGG TGGTGAGCGC CTTCCTCGGC
TTCATCGTCA TCACCCTGAT CGGCAAGCTC ACCGGCCGCC GCGGCACCCG CTTCGAGAAC
AACCTCGTCC AGACCGCGGG CACCGCCGCC GCCTCGGGGG TGGGCTTCAT GGCGGTGGTG
CTCGCCGCCA TCGACATGCT GAACCAGCGC GGGCTCATGA ACCTGCACCT CTCGAGCCTC
CAGATCTTCG CCTGGCTCGC CCCCTCCGGC CTCCTCGGCG TGCTGCTCGC GGTGCCGCTG
CGCAAGCACT ACATCGACCA GGAGAACCTC CCCTTCGCGG ACGGCACCGC CGCCGGCGAG
ACGCTGCTCG TGCTCGACGA GGGGCCGAAG CAGGCGGGCC CGCGCGTCGC CGCGCTCGGG
ATCGGCGGGG CCATCTCGGT CGGGTTCACG GTGCTGCGCC AGGGGTTCAA GTGGATCCCC
GACACGATCG CGTTCGGCTT CCTCACGCCG CACGCCGAGG CGCTGCGGCT GGGGAGCGAG
GTGGGCGTCC TGTCGCTCGG GGCGGGCATC CTCGTGGGCC TCCGCGTGAC GCTCTCGATG
GGGCTCGGAA TGCTGCTCGG CTGGATCGTC GCGCCCGACC GGCTCTTCGC GCGTGGCCTC
GTGCCGGAGC TCACGTTCAA CGCCATCCTG CAGCGCTGGA TCATGTGGCC GGCGACCGGG
CTCATGGTGG CGGGCGGCCT CACCGCCCTC GTCCTGAAGT GGAAGGTGAT CGCGAAGACG
TTCCATGGGC TGTCGGGCAA GGAGGCCGAC ACGAGCGGCG ACTTCCCGAT GCGCTGGGTG
GTGTGGGGCG CCCTCGGGTG CGCCGTGGTG CTCGCCGCGG TGCAGAAGAT CTCGCTCGGC
TTCCCGATCT GGCTCTCCGC CGTCTCGGTG CTGCTCTCCA TCGTCCTCAT GCTCGTCGGC
ATCCGCGTGC TCGGCGAGAC GAACTGGGCA CCCATCTCGG CCATGGCGAA CGTGATGCAG
GCGGTGTTCG CCGTGCTCGC CCCAGGTCAC GTGCCCATCA ACATGGTGGG CTCCGGCATG
AGCGGCGCGG TCGCGGCGAA CGGCGAGCAC CTCATGCAGG ACTACCGGGC TGGCAAGATC
GTCGGCTCGA CCAACCGGCA CCTCACCTAC CTGCAGCTCA TCGGCGTCCC CATCGGCGCG
GCGGCGGTCG CCGTCGCCTA CCCGGCGGTG CGCGCCAAGT ACGGCATCGG GGGTGAGGGC
GGGCTCACCT CGCCCATCTC CGTGAAGTGG GCCGGGTTCG CGGAGCTGCT GTCGCAGGGC
TTCGGCGCGC TCCCGTCGAG CGCGCTCGTG GCGCTCGTCG TCGCGCTCGT CGCGGGGGTG
GTCCTGACGC TGCTCGAGGC GAGCCCGCGC TTCGGCCGCT ACGTCCCTTC CCCGACGGCC
ATCGGGCTCG GCGCGCTCAT CCCGGGCTTC GCGGTGGTGC CCATGGTGAT CGGCGGCGTC
GCCCAGGACC TCTGGCGCCG GCTGTCGCCG CGGACGGAGG ACGTGTACGC GACCCCGCTC
GCCTCAGGGT TCATCACCGG GGAGGCGCTC GTGCTGCTGT TCCTCGCGCT CTGGGCGGCC
GTCGCCGGCT GA
 
Protein sequence
MRELSPSTDL PNLVAPKREL TARAVAIAIL VAALMGAAEP TVVLRIGYGP NMSVVSAFLG 
FIVITLIGKL TGRRGTRFEN NLVQTAGTAA ASGVGFMAVV LAAIDMLNQR GLMNLHLSSL
QIFAWLAPSG LLGVLLAVPL RKHYIDQENL PFADGTAAGE TLLVLDEGPK QAGPRVAALG
IGGAISVGFT VLRQGFKWIP DTIAFGFLTP HAEALRLGSE VGVLSLGAGI LVGLRVTLSM
GLGMLLGWIV APDRLFARGL VPELTFNAIL QRWIMWPATG LMVAGGLTAL VLKWKVIAKT
FHGLSGKEAD TSGDFPMRWV VWGALGCAVV LAAVQKISLG FPIWLSAVSV LLSIVLMLVG
IRVLGETNWA PISAMANVMQ AVFAVLAPGH VPINMVGSGM SGAVAANGEH LMQDYRAGKI
VGSTNRHLTY LQLIGVPIGA AAVAVAYPAV RAKYGIGGEG GLTSPISVKW AGFAELLSQG
FGALPSSALV ALVVALVAGV VLTLLEASPR FGRYVPSPTA IGLGALIPGF AVVPMVIGGV
AQDLWRRLSP RTEDVYATPL ASGFITGEAL VLLFLALWAA VAG