Gene Anae109_0264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0264 
Symbol 
ID5377621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp307625 
End bp309745 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content70% 
IMG OID640841776 
ProductOPT family oligopeptide transporter 
Protein accessionYP_001377466 
Protein GI153003141 
COG category[S] Function unknown 
COG ID[COG1297] Predicted membrane protein 
TIGRFAM ID[TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.7216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.191897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCCCC GCAACCGGAC CGTGTCGCGA GGACCCCGAA TGGCCGAGCT CGCCACCCCC 
CCGCCCAAGG ACTTCAAGCC CTACATCGCC GACGAGACGA CGGTCCCCGA GTTCACGCTC
AAGGCGATCG TCGCCGGCGC GCTCGCGGGG ATCCTCTTCG GCGCCGCCAC CGTGTACCTC
GCGCTCAAGG CGGGCCTCAC GGTGTCGGCC TCGATCCCCA TCGCCGTCAT CGCCATCTCG
CTCGGGCGGA AGTTCCTCAA GACCTCCATC CTCGAGAACA ACATCATCCA GACGGCGGGC
TCGGCCGGCG AGTCGATCGC CGCCGGCGTG GTGTTCACGC TGCCCGGCTT CCTCTTCCTC
TCCGTCGATC CCTCGACGAA GGTCTCGGTC GGCGCGGGCT ACTTCGACTA CGTGACGCTG
TTCGCCCTCT CGCTCGTGGG CGGCATCCTC GGCGTCCTCA TGATGATCCC GCTGCGCCGC
TCCCTCATCG TGAAGGAGCA CGCGACGCTG CAGTACCCGG AGGGCACCGC CTGCGCGTCG
GTGCTCATCG CCGGCGACAA GGGCGGCGAG TTCGCCAAGA CCGCCTTCCA GGGCGTGGGG
CTCGCGCTCG GCTACGCCGT GCTGCAGAAG GTCTTCCACG TCATCGCGGA GACGCCCGCC
TGGGTCACCC GACAGACGAA CAAGTGGCTC CCGAACGCCA CCGTGAACGG CGAGATCACC
CCCGAGTACC TGGGCGTGGG CTACATCATC GGGCCGCGCA TCGCGGGCGT GCTCGTCGCG
GGCGGCGTGC TCGCCTGGCT CGCCCTCATC CCGCTCCTCT CGGTGCTCGT GCCGGCGGAC
GTCATCGCGG GCCAGCTCGT GAAGCTCGGG GACCTCAAGG ACGTCGCCAC CGCGGGCGGC
GCCGGGGGCT GGGATCCCGC GACGCACGCC TTCTCGAACC TGCCCAACGC CGTGTACCGC
GCCTACATCC GCCAGATCGG CGCGGGCGCC GTCGCGGCCG GCGGCTTCAT CACGCTCCTC
AAGACGCTCC CCACCATCTG GACGTCGCTC CGAGACTCGA TCGCCTCGCT CGGCGACAAG
GCCGCCCAGG CGGGCGTGCG CCGCACCGAG CGCGACCTGT CGTTCCTCAC CGTCATCATC
GGCAGCGTCG GCCTGGTCCT GCTCCTCGTC ATGCTCCCGC AGGTGCCGGG CGAGTCCGTC
CTCCAGAAGC TCCTGGTCGC GCTGCTCGTC ATCGTCTTCG GCTTCATCTT CGTGACGGTC
TCGTCGCGCA TCGTCGGCAT CATCGGCTCG TCCTCGAACC CGATCTCCGG CATGACCATC
GCGACGCTCA TGGCGACCGC CATGGTCTTC GTGGGCGTGG GCTGGACCGG CTCGGCGTAC
GAGCCCCTCG CGCTCGTGGT CGGCGGCATG GTCTGCATCG CCGCCGCGAA CGCGGGGGCG
ACGAGCCAGG ACCTCAAGAC CGGCTACCTC GTGGGCGCGA CGCCGCGCTA CCAGCAGATC
GCGCTCTTCG TGGGCGCCAT CTTCTCGGCC TTCGTCATTG GGCTCACGGT GAAGGTGCTC
GACACCCCCA CGGCGGACCT CGCCGCGCAG GGGGTCCAGC ACATGATCGG CACGGAGAAG
TTCCCGGCCC CCCAGGCGAC GCTCATGGCG ACGCTCATCA AGGGGCTGCT CTCCCTGAAC
CTCGACTGGC ACTTCGTGCT GGCCGGCGCG TTCTTCGCCG TGACCATGGA GCTGTGCGGC
GTGAAGTCGC TCTCGTTCGC CGTCGGCCTC TACCTGCCCC TCTCGACGAC GCTGCCGATC
TTCGTGGGCG GCGCCCTGAA GGGCGTCGTG GACTGGCTCG CGGCGCGGCG CGGCGAGCAC
GCGGAGGAGA GCGAGCTCGG CGGCGGCAGC CTGTTCGCCA CCGGCCTCGT GGCGGGCGGC
GCGCTCACCG GCGTCATCGT CGCGCTGCTC AACGTGAACG ACGGGGTGAA CCGCTTCATC
GGGACCACCC TCAACATGGA GCCGCGCATC GCCGGCATCA TCGGCCACGG CGGCTACCAG
GTGCTCGGGG TGCTCTTCTT CGCCGGGCTC GCGTTCGCGC TCTACCGCGC CGCGCGGCGG
TCGAAGCCTC CCGTGATCTA G
 
Protein sequence
MTPRNRTVSR GPRMAELATP PPKDFKPYIA DETTVPEFTL KAIVAGALAG ILFGAATVYL 
ALKAGLTVSA SIPIAVIAIS LGRKFLKTSI LENNIIQTAG SAGESIAAGV VFTLPGFLFL
SVDPSTKVSV GAGYFDYVTL FALSLVGGIL GVLMMIPLRR SLIVKEHATL QYPEGTACAS
VLIAGDKGGE FAKTAFQGVG LALGYAVLQK VFHVIAETPA WVTRQTNKWL PNATVNGEIT
PEYLGVGYII GPRIAGVLVA GGVLAWLALI PLLSVLVPAD VIAGQLVKLG DLKDVATAGG
AGGWDPATHA FSNLPNAVYR AYIRQIGAGA VAAGGFITLL KTLPTIWTSL RDSIASLGDK
AAQAGVRRTE RDLSFLTVII GSVGLVLLLV MLPQVPGESV LQKLLVALLV IVFGFIFVTV
SSRIVGIIGS SSNPISGMTI ATLMATAMVF VGVGWTGSAY EPLALVVGGM VCIAAANAGA
TSQDLKTGYL VGATPRYQQI ALFVGAIFSA FVIGLTVKVL DTPTADLAAQ GVQHMIGTEK
FPAPQATLMA TLIKGLLSLN LDWHFVLAGA FFAVTMELCG VKSLSFAVGL YLPLSTTLPI
FVGGALKGVV DWLAARRGEH AEESELGGGS LFATGLVAGG ALTGVIVALL NVNDGVNRFI
GTTLNMEPRI AGIIGHGGYQ VLGVLFFAGL AFALYRAARR SKPPVI