| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0237 |
|---|
| Symbol | |
|---|
| ID | 5378054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 270910 |
|---|
| End bp | 272103 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640841749 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001377439 |
|---|
| Protein GI | 153003114 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTC GATCCCATCG GATCTCGGCG CTCGTCGCGG CCTCGACGCT CGCGCTCGGC
GCATGCAAGG GCGGCGGCGG CGAGCAGGCC GCGGCGCAGC CGGAGCCGGT CACGCTGGCG
CCGGAGAACG TCACCACCGT GACGGAGCGG ACGCTGCAGT CCGGCCCGGA CATCTCCGGC
ACGCTGCGCG CCCGGCGCGC CGCCGCGCTG CGCGCGGAGG TCGGCGGGAC GGTGCTCGAG
GTCCTCGCCG AGGCGGGCGA GCGGGTGAAG CCGGGCCAGC TCCTCGCGCG CGTCGACGAC
ACCGCGCTGC GCGACGCGCT CATCGCCGCA CGCTCCGGCG TGAGCGCCGC GAAGAACACG
CTCCAGGTCG CGGAGGCGAA CGCGAAGCGC GCGCGGACGC TCGCCGAGGC GGGCGCCTTC
GCCGCCCAGC AGGCGGAGCA GGCGGAGGCC GCGCACGAGG GTGCCCGGGC GCAGCTCGCC
GACGCGCGGG CGCGCCTGGT CCAGGCCGAG CAGCAGGTGA GCAAGGCCCG CGTCCGCGCG
CCGTTCTCCG GCGTCGTCTC CGAGCGGCAG GTCTCCGTCG GCGACGTCGT CGCGCCCGGC
GCCCCGCTGT TCACGGTCAT CGACCCGACC CGCCTGCAGT TCGAGGCCTC GGTCCCGGCC
GCCCAGGTCG GGCTCGTGCG GCCGGGCGCG CGCGTGGACT TCACCGTCAC CGGCTTCGAC
CGGGTCTTCG AGGGCGCCAT CGAGCGGGTG AACCCCGCCG TCGATCCCGC CACGGGGCAG
GTGCGGGTCT ACGTGGACGT GAAGAACGAG AACGGCCAGC TCATCTCCGG CCTCTACGCG
CACGGGCGCG TGGCGGCCGA GAGCAGCACG GGCCCCTCGG CGCCGGCCGC GGCGGTGGAC
GACACGAGCA AGCCGCCGAC GGTGATGCGC GTCTCGGGCG GCAAGGTGGA GCGCGTGGAG
GTGCAGATCT CGGTGCACGA CGACGTGACC GGCGCGGTGG GCTTCCGCGC GGGCGTGAAG
CCGGGGGACG TGCTCGTGCT CGGCTCGGCG CGGGCGACGC TCGCGGAAGG CGCTCCGGTG
CAGGTCGCGC CGGCGGGCGC GGACCAGGGC TCCCGGGCGC AGCCGGCCCC GGAGTCCGGG
GCGCCCGCGG AGACGGGGGG CGGCGCGCAG GCGTCGGACG GCGGGGGGCG GTAG
|
|---|
| Protein sequence | MAGRSHRISA LVAASTLALG ACKGGGGEQA AAQPEPVTLA PENVTTVTER TLQSGPDISG
TLRARRAAAL RAEVGGTVLE VLAEAGERVK PGQLLARVDD TALRDALIAA RSGVSAAKNT
LQVAEANAKR ARTLAEAGAF AAQQAEQAEA AHEGARAQLA DARARLVQAE QQVSKARVRA
PFSGVVSERQ VSVGDVVAPG APLFTVIDPT RLQFEASVPA AQVGLVRPGA RVDFTVTGFD
RVFEGAIERV NPAVDPATGQ VRVYVDVKNE NGQLISGLYA HGRVAAESST GPSAPAAAVD
DTSKPPTVMR VSGGKVERVE VQISVHDDVT GAVGFRAGVK PGDVLVLGSA RATLAEGAPV
QVAPAGADQG SRAQPAPESG APAETGGGAQ ASDGGGR
|
|---|
| |