Gene Anae109_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0141 
Symbol 
ID5374477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp169662 
End bp170921 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content78% 
IMG OID640841653 
ProductTPR repeat-containing protein 
Protein accessionYP_001377343 
Protein GI153003018 
COG category[S] Function unknown 
COG ID[COG3824] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.455814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.196734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGGC CGCTTCGCCG CGCGGTGTGG CTCGTCCTCC TTGCGGCGTG CACCCGCCCC 
CCTGCGCCCA CCGCACCGTC GGCGCCCAAC CCGACCGCGC CCGCGGCGCG CGCGAGCAGC
GCGCCGACCG CCGCGGTACG GCCGCAGGGG GCCCCCGCCC CCTCGATCGT CTCTCCGGCC
GGCGCCCGGG CCGCGCCGCC TTGCCTCCCC GCCGAGCCCT CGGCCTCCCC CGGCGTGCTG
GCGGAGGAGT CCGCCGCGGC GCTCGAGCGT GGGTCGTCCG AGCGGGCGCT CGCCTGCGCC
GACGAGGCGC TGCAGCGCGC GCCGCGCCAC GTGGGAGCGC TCACCGCGCG CGGCGAGGCG
CTCGCGGCCG CCGGCCGGGT GGACGAGGCG CGCCTCGCGT TCGCGCGGGC GCTCGCCATC
GAGCCGGACG AGCCCCGCGC GCTGCTCGGC GCGGCCGAGC TCCACGTCCG CCGCCTCGCG
AGCTCACCGG AGGCCATCGA GGCGGGGCTC GAGTACGCCC TCCGCGGCGC GCGCGCCGCC
AATCTGCGGA AGGACCGCGA GCTCGCCGGG CGGCTCGAGC TCGTCGCCGG GATGGCCGAG
AACGACCTCG GCCGCAGCCA CCTCGCCCTC GGCCACCTCG ATCGCTCCGT CCAGGCCCTG
CCCGGCGACG CCGACGCCGT GTACGAGCGC GGCGTGGCGC TCTACGAGCT CTGCCGGTTC
GACGAGGCGC AGCGGGCCTT CGAGCGCGCC CTCGCGCTCG CCCCCGACGA TCCCTGGACG
ATCCACCAGC TCGGGCTGCT CGCGGAGCGC CGCGGCGACG AGCGGCGCGC GGCGTCGCTC
CTCGGCCGCG CGCGCTCGCT CGCGCCGGAC GACTTCAAGG TGGAGCTGCC CGTGGACATG
GGCGGCTTCC GCGACGAGGT GGAGGCCGCC GTCGCCTCGC TCCCCGCCGA GGAGCGCAGC
GCGCTCGGGT CGGTGCCCAT CGAGATCCAG GACCTGCCCG ACCTCGAGGA CCTGCTCGCC
GTGCACCCGC CGCTCTCGCC CTCGATCCTG GGGCTCTTCC GCGGCCCGTC CGAGGACGAG
CCCTGCACGC ACGCGGACGG GCCGCGCTGC CGCACCATCG TGTTCTACCG GAAGAACCTG
CTCCGCTTCG CCCGCGACCG GCGCGAGCTC ACCGAGCAGG TCCGCGTCAC GCTCCTGCAC
GAGCTCGGGC ACCTGCACGG CGAGAGCGAC GACGACCTGC GCGCGCGCGG CCTGGAGTAG
 
Protein sequence
MHRPLRRAVW LVLLAACTRP PAPTAPSAPN PTAPAARASS APTAAVRPQG APAPSIVSPA 
GARAAPPCLP AEPSASPGVL AEESAAALER GSSERALACA DEALQRAPRH VGALTARGEA
LAAAGRVDEA RLAFARALAI EPDEPRALLG AAELHVRRLA SSPEAIEAGL EYALRGARAA
NLRKDRELAG RLELVAGMAE NDLGRSHLAL GHLDRSVQAL PGDADAVYER GVALYELCRF
DEAQRAFERA LALAPDDPWT IHQLGLLAER RGDERRAASL LGRARSLAPD DFKVELPVDM
GGFRDEVEAA VASLPAEERS ALGSVPIEIQ DLPDLEDLLA VHPPLSPSIL GLFRGPSEDE
PCTHADGPRC RTIVFYRKNL LRFARDRREL TEQVRVTLLH ELGHLHGESD DDLRARGLE