Gene Anae109_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0088 
Symbol 
ID5377801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp108328 
End bp109401 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content74% 
IMG OID640841602 
Productradical SAM domain-containing protein 
Protein accessionYP_001377292 
Protein GI153002967 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.400989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.227798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCACG AGGCGCGCTA CTGGGAGCCC GCCGAGGGCG GGAGGGTGCT GTGCACGCTC 
TGCCCGCGCG CCTGTCGCAT CGGGGACGGC CAGGCCGGCT TCTGCTTCAT CCGACAGAAC
CGCGGGGGAC GGCTGCTCAC CGCCGGCTAC GGCCGCTCCA CGGGCTTCGC CGTGGATCCC
GTCGAGAAGA AGCCGCTCGC CCACTGGCTG CCGGGCTCGG CGGTGCTGTC CTTCGGCACC
GCGGGGTGCT GCCTGGGCTG CCGCTTCTGC CAGAACTGGG ACATCTCGAA GGCCCGCCTC
GACGATCGCG CCGCGGAGGA TCGCTGGTCG CCGGAGCGCG TCGCGGCGCT CGCGGTCGAG
GCGGGCGCGG CGGGGGTGGC CTTCACGTAC AACGACCCCA TCATCTGGGC GGAGTACGCC
ATCGACGTGG CCGAGGCGGC GCACGCGCGC GGCCTCTACA CCGTGTTCGT GACGAGCGGC
TACGTGGAGC CCGCGGCGCG CGCGGAGATC TTCCGCCACA TGGACGCGAC GAACGTGGAC
CTGAAGGCGT TCACCGAGGA CTTCTACGCG AAGGTGACCC TCGCGCACCT CGCGCCGGTG
CTCGACACGC TCGAGTGGCT CGCCCGCGAG ACGGACGTCT GGGTGGAGGT CACGAACCTC
CTCATCCCGG GCCTCAACGA CGCGGAGGAC GAGACGCGCC GCCTCGCCGA CTGGGTCGCC
GCGCACATGG GCGTCGACGT CCCCCTCCAC TTCACCGCCT TCCACCCCGA CTACAAGCTG
CGCGATCGGC CCCGCACGCC TCCCCGCACG CTCTCGCACG CGCGTGAGCT CGCGCGGGCG
GCCGGGCTGC GCCACGTCTA CACGGGCAAC GTGCACGATC CCGAGGGCCA GACCACCTTC
TGCCCGCGCT GCGGCGCCCG CGTCATCGAG CGCGACTGGC ACGCGGTGCG GGCGGTGCGG
ATGGCCAGGG GCGCCTGCGC GGCGTGCGGC GAGCGGATCG CGGGGCGCTT CGCCGACGGG
CCGGTGGCGC CGACCTCGGG CAGGCGCGTC GCGCTGGGGC TGCCGGACGC GTGA
 
Protein sequence
MLHEARYWEP AEGGRVLCTL CPRACRIGDG QAGFCFIRQN RGGRLLTAGY GRSTGFAVDP 
VEKKPLAHWL PGSAVLSFGT AGCCLGCRFC QNWDISKARL DDRAAEDRWS PERVAALAVE
AGAAGVAFTY NDPIIWAEYA IDVAEAAHAR GLYTVFVTSG YVEPAARAEI FRHMDATNVD
LKAFTEDFYA KVTLAHLAPV LDTLEWLARE TDVWVEVTNL LIPGLNDAED ETRRLADWVA
AHMGVDVPLH FTAFHPDYKL RDRPRTPPRT LSHARELARA AGLRHVYTGN VHDPEGQTTF
CPRCGARVIE RDWHAVRAVR MARGACAACG ERIAGRFADG PVAPTSGRRV ALGLPDA