Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_0086 |
Symbol | |
ID | 5377799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 102967 |
End bp | 104379 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640841600 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001377290 |
Protein GI | 153002965 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.300814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCGT CCCTGCCCTA TCTCGGCCTC GGCAGCGCTG AGTCGCTGCA GCAGGTCGCG GACGCATTCC CCGACGGCGT CTTCACGACC GACCGGGACG GCGTGATCAC CTACTGGAAC CCCGCCGCCG GGGCGATCAC CGGCTACTCC GCCGCGGAGG CGATCGGCCG CACCTGCGCG CTCCTCGCCG GGGACATGGG GCGCGGCTGC ATGTGCGGAG GCGGGCCGGT GCGCTGCGGG ATCTCCGACC GCGGGAAGAG CTCCAAGTGC TGCAGCATCC GCACGAAGGA CGGCCGGGAG CGGCTCATCG TGAAGAACGC GGTGGCCTTC CACGGGCCGG ACGGGACCGT CGCCGGCGCG CTCGAGAGCT TCACCGACGT CACGGACCTG AGCGTCGGCG CCATCCCGTG GGAGAGCGCG TGCGCGCTCC CGGCTCCGTC CGCCGGCGTC GCCGCCGCGG CGGAGGCCGC GCCGCCGGAG AGCGAGTGCG CAGGGCTCCT CGGCTGCCAC CCGGTCATGC GCGAGCTGTA CCGGATGATC GCCCTCGTCG CCCGCTCCGA CGCGACGGTC ATGATCCTGG GCGAGAGCGG CGTGGGAAAG GAGCGCGTGG CCGAGGCGAT CCACCGGCAG AGCCGGCGCG CGGCGGGGCC GCTCGTGCGG GTGTCGTGCT CCGCCCTCAA CGAGAACCTC CTCGAGAGCG AGCTCTTCGG CCACGTGAAG GGGGCGTTCA CCGGGGCGCT GCGCGACCGG CGCGGCCGGT TCCAGGAGGC GCACGGCGGG ACCCTCCTGC TCGACGAGAT CGGCGACATC TCACCGGCGG TCCAGGTGAA GCTCCTGCGC GTCATCGAGC AGCGCGTGGT CGAGCGGGTG GGCGACTCGC AACCGCTCCC GGTCGACGTG CGGCTCCTCT GCGCCACGCA CCGGGACCTG AAGCAGCTCG TGACCGACGG CCGCTTCCGC GCCGACCTGT ACTTCCGCCT GGCGGTGTTC CCGCTCCGCG TGCCGCCGCT GCGCGAGCGC GCCGAGGACG TGGCGCTCCT CTCGGAGGGC TTCCTCGCGC GGCTCGGCGC GCCGCCGCCC TCGCCGGAAG CGTCGCGGCT CCTCGCCGCC TACGCGTGGC CGGGGAACGT GCGCGAGCTG CAGAACGTGC TCGAGTACGC GGCGCTGCAG GCGGGCGGCG CGCCCATCTC GCCCGCCCAC CTCCCCGCCG AGATCCGCGG CGCCGCGCCG CCCACGCCGG AGCGCGCCGC GCCCGATCGC TCGGCGATCG TCGAGGCGCT CATCCGGACC GGCTGGAACC GCGCGCGCGC CGCCGACGTG CTCGGCATCT CGCGCGTGAC GCTGTGGAAG CGGATGAAGC GGCTCGGCGT GGTGGGCCCC GGCCCGATGG CGTCCGGGCG GGAGCCGCTC TGA
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Protein sequence | MIPSLPYLGL GSAESLQQVA DAFPDGVFTT DRDGVITYWN PAAGAITGYS AAEAIGRTCA LLAGDMGRGC MCGGGPVRCG ISDRGKSSKC CSIRTKDGRE RLIVKNAVAF HGPDGTVAGA LESFTDVTDL SVGAIPWESA CALPAPSAGV AAAAEAAPPE SECAGLLGCH PVMRELYRMI ALVARSDATV MILGESGVGK ERVAEAIHRQ SRRAAGPLVR VSCSALNENL LESELFGHVK GAFTGALRDR RGRFQEAHGG TLLLDEIGDI SPAVQVKLLR VIEQRVVERV GDSQPLPVDV RLLCATHRDL KQLVTDGRFR ADLYFRLAVF PLRVPPLRER AEDVALLSEG FLARLGAPPP SPEASRLLAA YAWPGNVREL QNVLEYAALQ AGGAPISPAH LPAEIRGAAP PTPERAAPDR SAIVEALIRT GWNRARAADV LGISRVTLWK RMKRLGVVGP GPMASGREPL
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