Gene Anae109_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0003 
Symbol 
ID5378152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3076 
End bp4185 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content75% 
IMG OID640841515 
ProductDNA replication and repair protein RecF 
Protein accessionYP_001377207 
Protein GI153002882 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.979634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTCC TCTCCCTCGC CGTCCAGGAC TTCCGGAACC TCGCCCAGGT CGAGCTCCTT 
CCCTCGCCGC GGGCGACGGT GCTCCTGGGC GAGAACGGCC AGGGGAAGAC GAACCTCCTC
GAGGCCATCT ACTTCCTCAC CACCCTGAAG CCGCTGCGCA CCGCGCGGCT CGCCGAGCTC
GTCCGCCACG GGGCGCAGAC GGGGCTCGTG GCGGGGGACT TCGACGGCCC CGGCGGGACG
CGCCGGGTGG CGGTGCAGGT CGCCCCCGGC GGGCGCGTGG CGCTCCTCGA CGGCAAGCCG
CAGGAGCGGC TCGACGCCTA CTTCGACGGG CTCGCCGCGG TCTGCTTCGC CCCGGACGAC
CTGCTCCTCG TGAAGGGTGG GCCGGAGGGG CGGCGCCGCT TCCTGGATCG CGCCGCCTTC
AACCGCTGGC CGGCGGTGCT CGGCGAGGCC CGGGAGTACG TGCGGGCGCT GCGGGCCCGC
AACGCCGCGC TGCGCGGCGG GTCACCCGAG GTCGAGGCGA GCTTCCGCGG CCCGCTCGTG
CGCGCCGGGG CGCGCATCGT GCGGCGGCGG CGCGACCTCG TCGAGGAGCT CGCCCCGCGG
GTGAGCACCG CCTTCCGCGA GATCTCCGGG CCGGCGGCGC CCGAGGCGCG CTTCGCCTAC
CGGCCCGCGG CCGGGGTGCA GGCGGAGGTC GGGGAGGCGG AGCTCGCCGA GCGCCTCGAG
CACGCGCTCG CGCAGCGGCT GGAGCGCGAT CGCGATCGCG GCTTCACCTC CGTCGGCCCG
CACATGGACG AGCTCGTGCT GGCCCTCGAC GGCCGCGGCG CGCGCGCCTA CGCGAGCCAG
GGCCAGCAGC GGGCCCTCGT GCTGGCCCTC AAGATCGCGG AGATCGAGAA CCTCCGCGCG
GCGCTCGGGC GCCCGCCGCT CCTCCTGCTC GACGACGTGT CGTCGGAGCT CGATCCCACC
AAGAACCGCT ACCTGCTCGC CTACCTGGCG GCCCTGCCGG CGCAGGCCTT CCTCACCACC
ACCGACCGCC GCCTGATCGA GCCCGCGGCG GGACCGGATA CGGCCTTTTA CAAGGTGGAG
GGTGGGATGG TGAGTCCGCT CATTTCCTGA
 
Protein sequence
MKLLSLAVQD FRNLAQVELL PSPRATVLLG ENGQGKTNLL EAIYFLTTLK PLRTARLAEL 
VRHGAQTGLV AGDFDGPGGT RRVAVQVAPG GRVALLDGKP QERLDAYFDG LAAVCFAPDD
LLLVKGGPEG RRRFLDRAAF NRWPAVLGEA REYVRALRAR NAALRGGSPE VEASFRGPLV
RAGARIVRRR RDLVEELAPR VSTAFREISG PAAPEARFAY RPAAGVQAEV GEAELAERLE
HALAQRLERD RDRGFTSVGP HMDELVLALD GRGARAYASQ GQQRALVLAL KIAEIENLRA
ALGRPPLLLL DDVSSELDPT KNRYLLAYLA ALPAQAFLTT TDRRLIEPAA GPDTAFYKVE
GGMVSPLIS