Gene Bcer98_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3970 
Symbol 
ID5343917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp4032151 
End bp4032702 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content32% 
IMG OID640841451 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001377147 
Protein GI152977630 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATA AGGAATTAGT GGGCGAATTG AAAAATCAAA ATATAGAAGC ATTAGATCAA 
GTTATTCTTC AGTATAGCAG GCTTATATAT GGCGTTATAG GAAGTATATT AGGAGAAAAT
CACGAAAGAG TTGAAATTGA GGAATGCTAT AACGATGTTC TTTTCATTCT GTGGTATAAA
ATAGATCATT TTCAAATTGA AAAGGGACAA TTTAAGAACT GGATTATTTC GATTGCGAAG
TTTAAGGCGT TAGATTATAA AAGAAAGTTT AAGCGAAAAT TGATAGAACA AACAATGGAA
CGTTGCATTT TACAAGATAA AGAAGATGTA GAACAAGTTT TGTTGAAAGA GGAAGAAAAA
GAATTTGTTT TAGAGGTCAT TCAACGACTT GATCAGGTGG ACTATCACAT TTTTTATCGA
AGATATATTG CAGATGAGAG TATAAAGCAG ATTTCTGAAG AACTACATAT GAGTACGAGT
GCCATTTATA CAAGATTGTC TAGAGGAAGG GAAAAATTAA AAAAGGGAAT GGAGGGATAT
TATGAGGTAT GA
 
Protein sequence
MNDKELVGEL KNQNIEALDQ VILQYSRLIY GVIGSILGEN HERVEIEECY NDVLFILWYK 
IDHFQIEKGQ FKNWIISIAK FKALDYKRKF KRKLIEQTME RCILQDKEDV EQVLLKEEEK
EFVLEVIQRL DQVDYHIFYR RYIADESIKQ ISEELHMSTS AIYTRLSRGR EKLKKGMEGY
YEV