Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_3959 |
Symbol | |
ID | 5344395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 4018001 |
End bp | 4019776 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640841442 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001377138 |
Protein GI | 152977621 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGATT TAGTACTCAT GATGATTGAG CGCGTTGGAT TAATTGTTAT ATTAGGTTTT TTACTTTCGC ATATTCGAAT TTTTCGACAT CTCCTTCATA AACAAGATGG ATATAAGGAT AAGCTTATGC TAATTTGTAT TTTTTCATTA TTTACAATTG TAAGCAATTA CACAGGAATT GAAATTGCAG GAAATACAAT TATGAATGAA AATTGGTTAC AAGGCGTTTC CTCGTCAAGT ACGATTGCAA ATACGCGTAT TATGGGTGTC GGAATTAGCG GTTTACTAGG GGGACCCATT GTCGGAATTG GTGTTGGGTT TATTTCTGGT ATTCATCGCT ATATGCTAGG GGGGACGACA GCTTTTAGCT GTGCTATTTC ATCTATTTTA GCAGGGATCA TTACAGGATA TATTGGCCGA ATTTTTCAAA AGCATAATCG TACAGTTACA CCTAAGTATT CAGCGTTTTT AAGTGTGGGT ATTGTTTCGG TGGAAATGGT TATGATTTTA TTTATTGTGA AAGATGGATG GAATATAGTG AAAACGATTG CGATGCCGAT GATTTTTGTA AATGGTTTTG GTAGTTTTAT TTTACTTTCC ATGGTGCAAG CAATTTTGCG ACAGGAAGAG AATGCAAAGG CATTACAAAC GCATAAAGTG CTTCGAATTG CTGATAAAAC ATTACCTTAC TTTCGTCAAG GGTTGACAGA AGAATCATGT AAACATGTGG CACAAATTAT CCATCGTTTT ACGGGAACGG ATGCGGTATC CTTAACAGAT ACAAAAAAAA TATTAGCGCA TGTGGGATTA GCATCGGATC ATCATATCCC TTCGCATAGT TTAATTACGG GATTATCAAA AAAAGTATTA CATACAGGGA AAATAATGAA GGCGAAATCA AGAGAAGTCA TTAACTGTCA GCATGAAGAC TGTCCATTAC AAGCGGCAAT TGTTATTCCT TTAACATCGC ACGGCAATAC AATTGGGACA TTAAAGTTAT ATTTTAAAAA TCCAAATCAG TTAAGTCGTG TAGAAGAGGA ACTAGCAGAA GGATTAGCAA AAATTTTCTC GACCCAGCTT GAATTAGGGG AAGCAGAGCT GCAAAGTAAA TTGCTTCAAG ATGCTGAAAT CAAAGCGTTA CAAGCACAAA TTAACCCACA TTTCTTATTT AATGCGATTA ATACAGTTTC AGCACTTTGT CGTACAGATG TAGAAAAAGC AAGGAAGCTC TTACTACAGC TTAGCGTCTA TTTTCGTTGT AACTTACAAG GAGCGCGGCA GCTGTTGATT CCACTAGAGC AAGAGCTGAA TCATGTGAAT GCGTATTTAT CGTTAGAGCA AGCGAGATTT CCAAATAAAT ATGAGGTTAA AACCTATATA GACGAAGGAT TAAAGACAAT GTTAATTCCA CCATTTGTGC TTCAATTGTT AGTTGAAAAT GCTCTTAGAC ATGCATTTCC GAAGAAGCAA CCGATTTGCC AAGTAGAAGT GTATGCGCAC GTTGAAGATG ATTTGATTCA TTTTAAAGTG AAGGATAACG GTCAGGGGAT TGAACAAGAG CGTTTAGAAC AATTAGGAAA AGCTGTTGTA ACATCCAAAA AAGGAACAGG TACAGCTTTA TATAACATTA ACGAACGGTT AATAGGGTTA TTTGGGAAAG AAACGACACT TCATATTCAA AGTGAATTAC AGAAAGGAAC CGAAGTTTTC TTTGCAATTC CGATTCAATA TGTAGAGGGG GAAGGAAGTA GTGGTAAAGG TATTAGTAGT AGATGA
|
Protein sequence | MLDLVLMMIE RVGLIVILGF LLSHIRIFRH LLHKQDGYKD KLMLICIFSL FTIVSNYTGI EIAGNTIMNE NWLQGVSSSS TIANTRIMGV GISGLLGGPI VGIGVGFISG IHRYMLGGTT AFSCAISSIL AGIITGYIGR IFQKHNRTVT PKYSAFLSVG IVSVEMVMIL FIVKDGWNIV KTIAMPMIFV NGFGSFILLS MVQAILRQEE NAKALQTHKV LRIADKTLPY FRQGLTEESC KHVAQIIHRF TGTDAVSLTD TKKILAHVGL ASDHHIPSHS LITGLSKKVL HTGKIMKAKS REVINCQHED CPLQAAIVIP LTSHGNTIGT LKLYFKNPNQ LSRVEEELAE GLAKIFSTQL ELGEAELQSK LLQDAEIKAL QAQINPHFLF NAINTVSALC RTDVEKARKL LLQLSVYFRC NLQGARQLLI PLEQELNHVN AYLSLEQARF PNKYEVKTYI DEGLKTMLIP PFVLQLLVEN ALRHAFPKKQ PICQVEVYAH VEDDLIHFKV KDNGQGIEQE RLEQLGKAVV TSKKGTGTAL YNINERLIGL FGKETTLHIQ SELQKGTEVF FAIPIQYVEG EGSSGKGISS R
|
| |