Gene Bcer98_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3948 
Symbol 
ID5344740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp4002031 
End bp4003452 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content36% 
IMG OID640841431 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_001377127 
Protein GI152977610 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA ATAAAATCCT AAAAAATGCA TCCTATCTTT TTGTAGGAAA TATTATCGTT 
CGGTTTGTAC TTGCAATTGC AACCATTCTC TTTGCAAGAT ATGTTTCACC TCATGATTAT
GGTATGTTTA CAGCGGCACT AGCTGTTTCT GCTGTCATTT GTTACTTTAC AGATGCTGGT
TTAACACATA CTTTTATGCG TGAGGGGACA AAACAAAACG CTAATATTAG CGAGCTTATC
AGCAGTTATC TACGCGTTCG CTTCATTTTA GCCGTTATTA TTTCGATTCT CTTTGCCATT
TTCGCACAAT TTTTCTATGA TAATGCTTAT TTACGTGCAA TGGTATATTT AGTTGTATTG
CCAACAATGT TTGGTGCCAC TTTACAAGGT GTCGGAATGG CTTACTTCCA AGTAACAGAA
CGCATGCAAT TTACTGCTAT TATCTCTGTA TTACAAGGTG TAACAGCAGC AGTGGCACTT
TTACTCGGCA TGAGCTTTAA GTGGTCACTT ATGATGGTTG CAGCAATGTA TGGAGCGTCA
AGCCTTGTAA CAGGACTGAT TGCCTTTATA ATGGTAACTC GTTATACAAC GATTCATAAG
GGCTGGGACC CCGGAATTTT AGATCAACTG CTCGTTTTCA CAATTAATGG CATTATTATT
ATGCTATTGC CACAGCTTGG TCCGATTATT TTGGAAAAAG TATCAACATT AAAACAGGTT
GGATTTTTCG GTGCTGCATC CAAAATCCCA GCTGTTCTTT ATCAAATCCC TGGTGTCATC
GCCGCAGCAT TTTATCCGAA ACTATTTGCT TTTGGAAATG AGAAAAATGT GGAAGAACAT
CGAAAGCTAT CACATTTTGA ATTAAAGTTG ATGTCATTTT TAGGAATGGG GATTTCGATT
CCATTTATTG CTGATCCAAA TTTTTGGATT GTTAGCTTAT TGGGCGAAGA GTATGCACCA
GCTGGTAATG CCCTCGCCAT TTTAGCATTT ATGGTTATTT TACAATCCAT TAACTATCCC
CTTGCTGATA ACTTAACAAC GATTGGTCAG CAATGGAAGC GTACATTAAC AATGGCAATT
GGTTTAGTCG TTGCCATCAT TAGCTATATT GTATTAGGTA GTAAATTCGG AATGATGGGA
GCTGCCACTT CAGCTATTCT TACAGAAGTT ACCTTGTTAA TCGGATTTAC TCTATTTATT
CATAAAGGTA TTGAACTTCT ATTCAAAGGA ATTCTCTTTA ACTCCTTAGC CTTTGCTATT
AGCTATTGCG CATATCGTAT GATATTCGTT ACTCTACCGT CATTAGTTGC TCTCATACTT
ACAGGCTTAT TATTTGGTAT GATTGGACTT GTTATTGATC CACAAATCCG TAAATTAATT
TTAGAATTTG TAAATAAAAA GGTACTTCGT AAAGAAGCTT AA
 
Protein sequence
MKTNKILKNA SYLFVGNIIV RFVLAIATIL FARYVSPHDY GMFTAALAVS AVICYFTDAG 
LTHTFMREGT KQNANISELI SSYLRVRFIL AVIISILFAI FAQFFYDNAY LRAMVYLVVL
PTMFGATLQG VGMAYFQVTE RMQFTAIISV LQGVTAAVAL LLGMSFKWSL MMVAAMYGAS
SLVTGLIAFI MVTRYTTIHK GWDPGILDQL LVFTINGIII MLLPQLGPII LEKVSTLKQV
GFFGAASKIP AVLYQIPGVI AAAFYPKLFA FGNEKNVEEH RKLSHFELKL MSFLGMGISI
PFIADPNFWI VSLLGEEYAP AGNALAILAF MVILQSINYP LADNLTTIGQ QWKRTLTMAI
GLVVAIISYI VLGSKFGMMG AATSAILTEV TLLIGFTLFI HKGIELLFKG ILFNSLAFAI
SYCAYRMIFV TLPSLVALIL TGLLFGMIGL VIDPQIRKLI LEFVNKKVLR KEA