Gene Bcer98_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3850 
SymbolprfA 
ID5345413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3907398 
End bp3908465 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content40% 
IMG OID640841336 
Productpeptide chain release factor 1 
Protein accessionYP_001377032 
Protein GI152977515 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000369919 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAGATC GTTTGCAAGC TGTAGAGGAT CGTTATGAGA AGTTAAATGA GTTATTAAGT 
GACCCAGCGG TTATTAATGA TTCTAATAAG CTTCGTGAGT ATTCAAAGGA ACAATCTGAT
ATTCAAGAAA CGGTAGAGGT GTATCGTGAG TATAAAGATG TTCGTGAGCA ATTGCAAGAT
GCGAAAGCGA TGTTAGAAGA TAAATTAGAT GCTGAGATGC GTGAAATGGT AAAGGAAGAA
GTTTCAGATT TAGAGGTACA GGAGAAGGAA TTATCAGATC GTTTGAAAAT TTTACTTGTA
CCAAAAGATC CGAATGATGA TAAGAACGTT ATTGTTGAAA TTCGCGGTGC AGCTGGTGGT
GATGAGGCAG CTTTATTTGC TGGCGATTTA TATCGTATGT ATAGTCGTTA TGCTGAGATG
CAAGGATGGA AAACAGACAT TATCGAAGCA AGTTACACAG AATTAGGTGG ATATAAAGAG
ATTATCTTTA TGATTAACGG TAAAGGCGCA TATGCGAAGT TGAAATTCGA AAACGGTGCG
CATCGTGTAC AACGTGTTCC AGAAACGGAA TCTGGTGGAC GCATTCACAC ATCTACAGCA
ACAGTAGCTG TATTACCAGA AGCGGAAGAA GTAGAAATCG ATATTCATGA AAAGGATATT
CGTGTGGATA CATTTGCTTC TAGTGGTCCT GGTGGACAAA GTGTTAATAC AACAATGTCA
GCGGTACGCT TAACTCACTT ACCAACTGGT GTAGTTGTAT CTTGTCAGGA TGAAAAGTCA
CAAATTAAGA ACAAAGAAAA GGCAATGAAA GTATTACGTG CGCGTATTTA TGATAAATTT
AGGCAAGAAG CGCAAGCTGA GTATGATCAA AACCGTAAAC AAGCTGTTGG TACGGGGGAT
CGTTCTGAGC GTATTCGTAC GTATAACTTC CCGCAAAACC GTGTTACAGA CCATCGAATC
GGCTTAACGA TTCAAAAGCT AGATCAAATT TTACAAGGTA AGTTAGATGA TTTCATCAAC
GCGCTAGTAA TGGAAGATCA GGCGAAGAAG ATGGAGGCCG CTGAGTAA
 
Protein sequence
MLDRLQAVED RYEKLNELLS DPAVINDSNK LREYSKEQSD IQETVEVYRE YKDVREQLQD 
AKAMLEDKLD AEMREMVKEE VSDLEVQEKE LSDRLKILLV PKDPNDDKNV IVEIRGAAGG
DEAALFAGDL YRMYSRYAEM QGWKTDIIEA SYTELGGYKE IIFMINGKGA YAKLKFENGA
HRVQRVPETE SGGRIHTSTA TVAVLPEAEE VEIDIHEKDI RVDTFASSGP GGQSVNTTMS
AVRLTHLPTG VVVSCQDEKS QIKNKEKAMK VLRARIYDKF RQEAQAEYDQ NRKQAVGTGD
RSERIRTYNF PQNRVTDHRI GLTIQKLDQI LQGKLDDFIN ALVMEDQAKK MEAAE