Gene Bcer98_3747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3747 
Symbol 
ID5347137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3802957 
End bp3803694 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content36% 
IMG OID640841238 
Productpolysaccharide deacetylase 
Protein accessionYP_001376934 
Protein GI152977417 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000014318 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGC GAGTATGTCA ATGTATAATA ATACTTTTAG CTATGATGAT ATGTACAGCA 
TCTTATATTG AAGCAGCGAC GAACTCTCTA GTTGAACATC GTTCTACTAT CCAGACTGCT
GCACTTCCAC AAAAAATTGC GTACTTAACA TTTGATGATG GACCAAACAA ATATACATCA
CAAATTTTAA ACATCTTAAA ACAAAAAAAT GCAAAAGCTA CCTTCTTTGT TATTGGTGGA
AGAGTATCTC GTTATCCCCA AACAACGAAA CGTTTAATTA GGGAGGGACA TTACATCGGA
CTCCATAGTA TGTCCCATGA TGCAAAACGT CTATATACTG GAGATCCATC CATTTTAATT
TCTGAAATGA TGCAAGCCCA AAAAATTGTC CAGCAAGTAA CAAAGTTAAA CTCCCGTCTC
GTTCGTGTTC CTTATGGCAG CATGCCATAT TTAAAAAAGA ACTATCGAGA TGCACTCGTT
TCTGCTCATT ATAAATTGTG GGATTGGACC ATTGATACAT ATGATTGGAA AAGCTACAAT
AATCCTTCTG CGGTTCTAGA ACGTGTGATG AACCAAAGTG ACGAACCAGT AGAAGTAATT
TTAATGCATG ATTCAAGTGT CACCGTACAA ATCCTTCCTA AAGTAATTGA TTATCTTCAA
TCAAAGGGCT ATACACTTCT TTCTTATAGT CCCTCCTCCC ATGTAGAGGT AAACTTTTGG
AAAGACACAA GATTGTAA
 
Protein sequence
MMKRVCQCII ILLAMMICTA SYIEAATNSL VEHRSTIQTA ALPQKIAYLT FDDGPNKYTS 
QILNILKQKN AKATFFVIGG RVSRYPQTTK RLIREGHYIG LHSMSHDAKR LYTGDPSILI
SEMMQAQKIV QQVTKLNSRL VRVPYGSMPY LKKNYRDALV SAHYKLWDWT IDTYDWKSYN
NPSAVLERVM NQSDEPVEVI LMHDSSVTVQ ILPKVIDYLQ SKGYTLLSYS PSSHVEVNFW
KDTRL