| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_3505 |
|---|
| Symbol | ldh |
|---|
| ID | 5345565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 3568086 |
|---|
| End bp | 3569033 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640840982 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_001376705 |
|---|
| Protein GI | 152977188 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GCATTAATCG TGTAGTATTA GTAGGAACAG GAGCTGTAGG TTGTAGTTAC
GCTTATTCCA TGATTAACCA AGGTGTAGCT GAAGAATTCG TGCTTGTAGA TGTGAATGAA
GCAAAGGCAG AAGGAGAAGC GATGGACTTA AGCCATGCGG TACCATTTGC TCCATCACCA
ACAAAGATTT GGAAAGGTAG CTATGAAGAT TGTAAGGATG CTGACATTGT CTGTATCACA
GCTGGATTAC CACAAAAACC AGGTGAAACT CGTTTAGATT TAGTGGAGAA AAATGCAAAA
ATCTTTAAGC AAATTGTTCG TAGTATTATG GATACTGGTT TCGATGGGAT TTTCTTAATC
GCAACTAACC CAGTTGATAT TTTAACTTAT GTAACTTGGA AAGAATCTGG ATTACCAAAA
GAGCGTGTAA TTGGTTCTGG TACAACTCTT GACTCTGCTC GTTTCCGCTA CATGTTGGGT
GATTACTTCG ATGTGGATCC ACGCAATGTT CATGCATATA TCATTGGGGA ACATGGTGAT
ACTGAACTTC CAGTTTGGAG TCATGCGACA ATAGGTGTTC AAAAAATTGA AAAAATTATG
TCTGATAACA AAGAAAAATA CAGCCAAAAA GATTTAGAAG ATATCTTTGT CAATGTTCGT
GATGCTGCTT ATCATATCAT CGAGCGTAAA GGCGCAACTT ACTATGGAAT CGGTATGTCA
CTACTTCGTG TAACAAAAGC AATTTTAAAC AACGAGAACA GCGTATTAAC TGTATCTGCA
TACCTTGAAG GCCAATATGG TGAGAAAGAT GCTTATGTAG GTGTTCCTGC TATTATTAAT
CGTCAAGGTG TACGTGAAAT TGTTGAGCTC GAGTTGAATG AAGAAGAAAA AGCAAAATTC
GCTCATTCTG TAAAAGTATT GAAAGAAACA ATGGCACCAG TATTATAA
|
|---|
| Protein sequence | MKKGINRVVL VGTGAVGCSY AYSMINQGVA EEFVLVDVNE AKAEGEAMDL SHAVPFAPSP
TKIWKGSYED CKDADIVCIT AGLPQKPGET RLDLVEKNAK IFKQIVRSIM DTGFDGIFLI
ATNPVDILTY VTWKESGLPK ERVIGSGTTL DSARFRYMLG DYFDVDPRNV HAYIIGEHGD
TELPVWSHAT IGVQKIEKIM SDNKEKYSQK DLEDIFVNVR DAAYHIIERK GATYYGIGMS
LLRVTKAILN NENSVLTVSA YLEGQYGEKD AYVGVPAIIN RQGVREIVEL ELNEEEKAKF
AHSVKVLKET MAPVL
|
|---|
| |