Gene Bcer98_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3454 
Symbol 
ID5346466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3518346 
End bp3519350 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content37% 
IMG OID640840936 
ProductABC transporter, substrate-binding protein 
Protein accessionYP_001376659 
Protein GI152977142 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAT TGTTAGCGGT TTTCTGTATA TTTGTCCTTA CTGTTGTAAC GCTTGTCGCC 
TGCAGTAAAA CGGAAAATAC GAACCAACAA ACGCACAAAA TTAGAATTGG CGAAGTAACA
CATTCTCTTT TTTATACACC GTTATATGTC GGTATGGAAA AAGGTTTTTT TAAAGAGGAA
GGGCTAGATA TTGATTTACA AACAACAGCA GGTGGCGATA AAACGATGAC CGCCTTATTA
TCTGGCGGAA TTGATATTGC ACTTGTCGGG TCTGAAACAT CCATTTATGT TCACCAGCAA
GGAGCTAAAG ATCCGATTAT TAACTTTGCT CAGCTTACAC AAACTGATGG GACTTTTTTA
GTATCACGTA AAAAGTTAGA TTCTTTTAAT TGGAATGATG TAAAAGGTGT CACTTTCCTA
GGGCAACGGA AAGGCGGTAT GCCACAAATG GTCGGAGAAT ACGTTTTAAA GAAGAACGGC
ATCGATCCGC ATAAAGACAC GAATCTTATT CAAAATATTG AGTTTGCAAA TATCGCAAAT
GCTTTTGCAT CTGGTACAGG GGAATTTGTT CAACTTTTTG AACCAACAGC AAGCATTTTT
GAAAAAGAAG GAAAAGGATA TATCGTCGCT TCTTTTGGAG CTGAATCAGG AACTGTTCCT
TACACAACAT TTATGGCAAA GCAAAGCTTT TTGAAGAAAG AGAAAGCCGC AGCCGAAAAG
TTTACACGTG CCTTATATAA AGCGCAACAA TGGGTTGATA CACATACACC TGAAGAAATA
GCCGATGTTG TTACTCCTCT TTTTCAAGAC ACTTCAAAAG ATATTACCGT AAAAGTCATT
GAGCGCTATA AAAAACAACA TTCTTATGCA ACGGATCCTT TATTAGATGA AAAAGAATGG
GTACAGCTAC AAGCAATCAT GAAAGAAGCT GGCGAATTAC AAAAAGAAGT TCCACATCAA
GCGCTTGTGA ATACAAATAT TGCTAAGAGC GTTATTAAGA AATAG
 
Protein sequence
MKKLLAVFCI FVLTVVTLVA CSKTENTNQQ THKIRIGEVT HSLFYTPLYV GMEKGFFKEE 
GLDIDLQTTA GGDKTMTALL SGGIDIALVG SETSIYVHQQ GAKDPIINFA QLTQTDGTFL
VSRKKLDSFN WNDVKGVTFL GQRKGGMPQM VGEYVLKKNG IDPHKDTNLI QNIEFANIAN
AFASGTGEFV QLFEPTASIF EKEGKGYIVA SFGAESGTVP YTTFMAKQSF LKKEKAAAEK
FTRALYKAQQ WVDTHTPEEI ADVVTPLFQD TSKDITVKVI ERYKKQHSYA TDPLLDEKEW
VQLQAIMKEA GELQKEVPHQ ALVNTNIAKS VIKK