Gene Bcer98_3288 details

Gene Information

• Locus tag: Bcer98_3288
• Symbol: dnaE
• ID: 5345595
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cytotoxicus NVH 391-98
• Kingdom: Bacteria
• Replicon accession: NC_009674
• Strand: -
• Start bp: 3358597
• End bp: 3361926
• Gene Length: 3330 bp
• Protein Length: 1109 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640840779
• Product: DNA polymerase III DnaE
• Protein accession: YP_001376502
• Protein GI: 152976985
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGTTTG TGCATTTACA ATGTCAAACC GTTTATAGTT TGTTAAAAAG TGCTTGTAAA 
ATTGATGAAC TTGTGGCTAG AGCGAAAGAA CTTGGGTTTT CAGCTCTTGC AATTACAGAT 
GAAAACGTGA TGTACGGAGT TATTCCATTT TATAAAGCAT GTAAGAAGAT GGGGATAAAG 
CCGATTATCG GATTAACAGC TTCCGTTTTT AATGAGGAAG AAGAACGCGC TTATCCACTT 
GTTTTATTGG CTGAAAATGA AGTAGGTTAT CAAAATCTAT TGAAAATTTC TAGCACCATT 
ATGACAAAGT CTAAAGATGG AATTCCAAAA AAGTGGCTTG TCCATTATGC GAAAGGATTA 
ACCGCAATTT CACCAGGGAA AGATGGAGAA ATTGAACAAT TATTATTGCA AGGAAAAGAT 
GAGCGTGCAG AAGAAGTTGC CCGCACGTAC CAAAATATGT TTGGCCATTT TTATATGAGT 
GTGCAGCATC ATGCAATTCA AGATGAATTA TTGTTGCAAG AAAAAATAGA AGAGTTTGTC 
AGAAATATGA ACATTCCAAT CGTGGCAACA AATGATGTTC GTTATATTAA TCAAAACGAT 
GCACTTGTGC AAGAATGTTT ATTATCTGTC CAGAGCGGTA CAAAGATGAC GGATCCGGAT 
AGGCCAAGGT TGAAAACGGA TCAGTACTAT TTGAAATCAT CCGCTGAAAT GGAAGCCTTA 
TTTTCTCATG TGGAAGAAGC ACTTCGTAAT ACCATTCATA TTGCAGAACG TTGCCATGTA 
GAAATTCCAT TTCATGTGAA TCAATTACCG AAATTTCCTG TTCCTACTAA TGAAACGAGC 
GATGCTTATT TGCGCCGAAT GTGCGAAGAG GGGCTATATA AACGCTATGG AACGCCAAAA 
GAGGTACATG TGAACCGTTT ATATCATGAA CTTGAAGTTA TCTCTCGCAT GGGGTTCAGT 
GATTATTTCC TCATCGTATG GGACTTTATG AAATATGCAC ACGAGAATAG GATTTTAACA 
GGGCCAGGAC GTGGATCGGC AGCGGGTTCA CTTGTCGCAT ATGTACTAGA GATTACAGAT 
ATTGACCCAA TTGCATACAA TTTATTATTT GAAAGATTTT TAAATCCAGA ACGTGTTACA 
CTTCCGGATA TTGATATTGA TTTTCCTGAT GTAAGACGCG ATGAAATGAT TCGTTATGTA 
AAGGATAAAT ACGGCCAGCT TCGTGTTGCT CAAATTGTTA CGTTCGGAAC ACTGGCTGCA 
AAAGCAGCAA TCCGTGATAT TGCTCGTGTA ATGGGATTGC CGCCTCGAGA TATTGATTTG 
TTCTCTAAAC TGATTCCATC GAAACTTGGG ATTACATTGA AAGAAGCTTA TGAGGAGTCA 
GAAGCACTTC GTGATTTTAT TCAAGGAAAT CTTTTGTATG AACGTGTGTT TGAAATTGCA 
AAACGTGTGG AAGGATTACC GCGTCATACG TCTATCCATG CAGCTGGCGT TATTATGAGT 
CAAGAGCCCC TAACAAAAAG TATTGCGATT CAAGAGGGGC ATAATGACGT ATATGTAACG 
CAATATCCAG CGGATGTTTT AGAAGAACTT GGACTACTAA AGATGGACTT TTTAGGGTTG 
CGCAATTTAA CATTGCTTGA AAATATTCTT ACTTTTATTA CAACAACGAC TGGAAAACAA 
ATTGATATAA GGAATGTATC GCTCCAAGAT GAAAAGACAT TTCAATTGCT CGGAAGAGGA 
GATACAACAG GGGTATTTCA GCTTGAATCA GGTGGAATGC GAAATGTACT TCGCGGGTTA 
AAGCCAAATG AATTTGAAGA TATCGTTGTC GTCAACTCTT TATATCGCCC AGGACCGATG 
GAACAAATTC CAGTCTTTAT TGAATCTAAA CATGGAAGAC GAAACATTCA ATATTTACAT 
CCAGATTTGA AACCGATTTT AGAGAGTACA TATGGTGTAA TTGTTTATCA AGAACAAATT 
ATGCAAATTG CTTCTAAATT AGCTGGATTT TCACTTGGAG AAGCGGATTT ACTTCGCCGT 
GCAGTCAGTA AAAAAAGTCG AGATATTTTA GAGGAAGAGC GAAAGCATTT TGTGCAAGGT 
TGTTTACAAA ATGGATATGA TCAAACATCT GCAGAGCAAA TTTACGATTT AATTGTTAGA 
TTTGCAAATT ACGGTTTTAA CCGAAGCCAT GCGGTGGCCT ACAGTATGAT TGGGTATCAA 
CTTGCATATT TAAAAGCGAA TTATCCACTT CAGTTTATGA CCGCTCTATT ATCCAGTGCA 
ATTGGAAATG AAGATAAGAT TACGCAATAT ATACGCGAAA CAAAACGCAA AGGTTTCTGT 
GTTTTGCCGC CATCACTTCA TAGAAGTGGC TATCATTTTC AAATTGAAGG GAATGCGATT 
CGTTATAGCC TTCTTTCCAT TCGAAATATT GGGATGGCAA CAGTGACTGC TTTGATTGAA 
GAAAGAGAGA AAGCGCCGTT TCAAGATTTA TTTGAGTTTT GTCTTCGAAT GCCAGTGAAA 
TTTGTAACAG AGCGCAATTT AGAGGCGTTT GTTTGGTCTG GTTGTTTCGA TGATTTTCAA 
GTTTCACGAA CAACTTTGTT TAACAGCATA AAGGGTGCTC TAGAATACGC AAGTCTTGCG 
CGTGAATTAG GAGAAGAAAG TGTACCAAAA TCAGTTTACG TGCAAGGGAA AGAGTTGTCT 
TTTATCGAAC AATTGAATAA GGAAAAAGAA ACGCTTGGTT TTTATTTATC AAGTTATCCG 
ACAGCTCAGT ATGCAAGTTT AGTAAAAGAA TTAGAAATCC CTTCTCTTGC GCAAGCAATG 
AGACAAAAAG GAAAAGTACA ACGCGCGATT GTTTACATTA CAAGAGTGAA AATAATTCGC 
ACAAAAAAAA TGCAAAAAAT GGCATTTGTT ACGTTTTGTG ATCAGAATGA TGAAATGGAA 
GCGGTTGTTT TTCCAGAGAC ATACATTCAT TTTTCAGAAA GGTTACAAGA AGGAGAAATT 
GTTCTTGTTG AGGGAACGGT AGAATCTAGA AATAATAAAT TACAGTGGAT TATAAATGGG 
CTGTATTCAT TAGAACAAAT GGATGTATAT AACGAAATGA AAGAAGCATC CATTTATGTC 
AAATTACCTT CGCAGTACGA TAAGAAGTTA TTCAATCAAG TTACAAAAAT ATTATTTCAC 
TATTCAGGTT TTGCGAAAGT ACTAATTTAT TATGAAAAGG AACATAAAGT GGTACAATTA 
TCTCGTAGTT TGTCAATCCA TCCGAGCGAG GAATGTTTAA GAACACTTCG TGAAATTGTC 
GGCAAAGAAA ATGTGGTCGT AAAAATATAA 

 

Protein sequence

MKFVHLQCQT VYSLLKSACK IDELVARAKE LGFSALAITD ENVMYGVIPF YKACKKMGIK 
PIIGLTASVF NEEEERAYPL VLLAENEVGY QNLLKISSTI MTKSKDGIPK KWLVHYAKGL 
TAISPGKDGE IEQLLLQGKD ERAEEVARTY QNMFGHFYMS VQHHAIQDEL LLQEKIEEFV 
RNMNIPIVAT NDVRYINQND ALVQECLLSV QSGTKMTDPD RPRLKTDQYY LKSSAEMEAL 
FSHVEEALRN TIHIAERCHV EIPFHVNQLP KFPVPTNETS DAYLRRMCEE GLYKRYGTPK 
EVHVNRLYHE LEVISRMGFS DYFLIVWDFM KYAHENRILT GPGRGSAAGS LVAYVLEITD 
IDPIAYNLLF ERFLNPERVT LPDIDIDFPD VRRDEMIRYV KDKYGQLRVA QIVTFGTLAA 
KAAIRDIARV MGLPPRDIDL FSKLIPSKLG ITLKEAYEES EALRDFIQGN LLYERVFEIA 
KRVEGLPRHT SIHAAGVIMS QEPLTKSIAI QEGHNDVYVT QYPADVLEEL GLLKMDFLGL 
RNLTLLENIL TFITTTTGKQ IDIRNVSLQD EKTFQLLGRG DTTGVFQLES GGMRNVLRGL 
KPNEFEDIVV VNSLYRPGPM EQIPVFIESK HGRRNIQYLH PDLKPILEST YGVIVYQEQI 
MQIASKLAGF SLGEADLLRR AVSKKSRDIL EEERKHFVQG CLQNGYDQTS AEQIYDLIVR 
FANYGFNRSH AVAYSMIGYQ LAYLKANYPL QFMTALLSSA IGNEDKITQY IRETKRKGFC 
VLPPSLHRSG YHFQIEGNAI RYSLLSIRNI GMATVTALIE EREKAPFQDL FEFCLRMPVK 
FVTERNLEAF VWSGCFDDFQ VSRTTLFNSI KGALEYASLA RELGEESVPK SVYVQGKELS 
FIEQLNKEKE TLGFYLSSYP TAQYASLVKE LEIPSLAQAM RQKGKVQRAI VYITRVKIIR 
TKKMQKMAFV TFCDQNDEME AVVFPETYIH FSERLQEGEI VLVEGTVESR NNKLQWIING 
LYSLEQMDVY NEMKEASIYV KLPSQYDKKL FNQVTKILFH YSGFAKVLIY YEKEHKVVQL 
SRSLSIHPSE ECLRTLREIV GKENVVVKI