Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_3254 |
Symbol | |
ID | 5345434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 3320209 |
End bp | 3321948 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640840745 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001376468 |
Protein GI | 152976951 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCAT CTTTAATAGT AGGATATGCT ATATTTTGTA TTATAGTCTT CTTCCTGGTA AATCGTCTTT TTAGAAAGAA AAAAACAAAC GCGGGAGAAG AGAAGGTCCC AGCCGTAAGT AAAATAGAAA CGAAGCAACC GGAACAAAAA GCTTCCAATC TTGTAGAATT AGAAGCAGCT AAGAAAGAAG TACCCAAAAA GCATTTGCCA ATAGAAAATG TAAATGTAAA AGCAGTTGTG ACAGTATTGA TTCTTGGCAT GTTTGTTTCG ATTTTAAACC AAACGATTAT TAATGTTGCT TTGCCACCAT TAATGAATGA ATTTAATGTC TCAACTTCAA CAGCGCAATG GTTAATTACA GGATTTATGC TTGTAAACGG GATTTTAGTC CCAATCAGTG CCTTTTTAGT ATCGCGCTTT ACGTATCGTA ATTTATTTAT AGCAGCAATG GTATTTTTTA CAGTAGGTTC TATTATTTGT GCTATATCTG GAAACTTTAC GATGATGATG ATAGGCCGTG TAATTCAAGC AGTTGGTGCA GGTGTTTTAA TGCCAATTGG TATGAATATT TTTATGACAC TGTTCCCTCC CCATAAGCGA GGAGCTGCGA TGGGATTATT AGGGGTAGCG ATGATTTTAG CACCAGCTAT TGGACCGACT GTAACAGGTT GGGTCATTGA AAATTACAGC TGGAACTTAA TGTTCTATGT GATGTTTGTG ATTGGCCTAA TCATTACTTT ATTATCATTA AAATTCTTTA CACTAGCACA GCCAGTATCG AAAGCGAAAT TGGATTTATT TGGTGTAATT AGCTCAAGTA TTGGACTTGG TAGCTTATTA TATGGATTTA GTGAAGCCGG CAATAATAGT TGGAGCAGTA CAGAAGTTGT TGTTTCTCTG ATCATCGGTA CAATTGGTCT TGCATTGTTT ATTTGGAGAG AAATGACGAC GGATAATAAA ATGTTGGATT TACATGTATT TAAGTATCCA ACATTTACTT TCACATTGTT AATTAACGCA ATTGTAACAA TGGCGCTATT TGGAGGTATG TTATTACTTC CTGTCTATCT GCAAAATATT CGTGGTTTTA CGCCAATTGA ATCCGGTCTA CTGCTTCTTC CAGGATCATT AATTATGGGG ATTATGGGAC CGATTGCAGG GAAACTATTT GATAAGTATG GCATTCGTCC CTTAGCAATC ATTGGGTTAG CAATTACAAC ATATGCAACA TATGAATTTA CGAAATTAAC AATGGAGACA CCATATAGTG TAATCATGAG AGACTACATC ATACGTTCAA TCGGAATGTC GTTTATTATG ATGCCAATTA TGACAGCTGG TATGAATGCG TTGCCGATGA AATTGATTTC GCATGGTACA GCAACACAAA ATACGTCAAG ACAAGTCGCC GGTTCAATTG GTACAGCGAT TTTAATTACA ATTATGACGC AGCAAACAAA CTATCACGTA GCAGATTACG GAAATATGTT AACAACGACA AATCCGATTT TAGTTGATAA AGTACACGGA ATGGGACAAA GCTTAGCAGC TTTAGCTGGT TCCGCACAAG CTGGAGATGT GATGAGTACG CAACTATTAT ACGGACAAAT TTCAAAGCTA TCTGCAATTA ACGGTATTAA TGATGCGTTC TTAATTGCAA CCATATTAGC GGGTATTGCC TGGGTATTAT CATTCTTCTT GAAATCAGGT AATAAGCCAA ATCGAAAAGC AGGGAATTAA
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Protein sequence | MSSSLIVGYA IFCIIVFFLV NRLFRKKKTN AGEEKVPAVS KIETKQPEQK ASNLVELEAA KKEVPKKHLP IENVNVKAVV TVLILGMFVS ILNQTIINVA LPPLMNEFNV STSTAQWLIT GFMLVNGILV PISAFLVSRF TYRNLFIAAM VFFTVGSIIC AISGNFTMMM IGRVIQAVGA GVLMPIGMNI FMTLFPPHKR GAAMGLLGVA MILAPAIGPT VTGWVIENYS WNLMFYVMFV IGLIITLLSL KFFTLAQPVS KAKLDLFGVI SSSIGLGSLL YGFSEAGNNS WSSTEVVVSL IIGTIGLALF IWREMTTDNK MLDLHVFKYP TFTFTLLINA IVTMALFGGM LLLPVYLQNI RGFTPIESGL LLLPGSLIMG IMGPIAGKLF DKYGIRPLAI IGLAITTYAT YEFTKLTMET PYSVIMRDYI IRSIGMSFIM MPIMTAGMNA LPMKLISHGT ATQNTSRQVA GSIGTAILIT IMTQQTNYHV ADYGNMLTTT NPILVDKVHG MGQSLAALAG SAQAGDVMST QLLYGQISKL SAINGINDAF LIATILAGIA WVLSFFLKSG NKPNRKAGN
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