Gene Bcer98_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3242 
Symbol 
ID5343783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3308980 
End bp3309519 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content33% 
IMG OID640840733 
Productcolicin V production protein 
Protein accessionYP_001376456 
Protein GI152976939 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00343248 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATA TCATTATCAT TTTATTGCTT GTTATGGGAT TTTTCCTCGG TTTAAGAAGA 
GGATTTATTC TACAACTTGT AAAGTTAACA AGCTTTATTA TCGCATACCT TGTTGCATAC
TGGTACTGTA AAGATTTAGC GCCAGCGTTG GCGAAAATGA TTCCGTATCC GTTTGATAAA
AATGTATCCG TTCCAGAATG GATTGATGCA AACAATATTG AGGCAGTATT TTATCAAGCA
ATTGCGTTTA TTATACTGTT TATTGTTACA AAGATTGCAC TTTCCTTACT TGGTAATTTG
TTAAATATGT TTGCGGAAAT ACCAGTGTTA AAGCAAATTA ATGCATTTGC TGGAGCAATT
CTTGGTTTTT TAGAAGTATA CATTATTTTG TTTGTTTTAA TTATTATTGG CACGATTCTT
CCGATTGAAC AAGTGCAAAC ACCATTACAA AAATCATCAA TTAGCAAAAT AATTGTAGAC
GATACACCGA TTCTTTCTGA AAAGGTGAAG GAACTATGGC AGACAGGTAG CAGAGTATAA
 
Protein sequence
MIDIIIILLL VMGFFLGLRR GFILQLVKLT SFIIAYLVAY WYCKDLAPAL AKMIPYPFDK 
NVSVPEWIDA NNIEAVFYQA IAFIILFIVT KIALSLLGNL LNMFAEIPVL KQINAFAGAI
LGFLEVYIIL FVLIIIGTIL PIEQVQTPLQ KSSISKIIVD DTPILSEKVK ELWQTGSRV