Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_3242 |
Symbol | |
ID | 5343783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 3308980 |
End bp | 3309519 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640840733 |
Product | colicin V production protein |
Protein accession | YP_001376456 |
Protein GI | 152976939 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00343248 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATA TCATTATCAT TTTATTGCTT GTTATGGGAT TTTTCCTCGG TTTAAGAAGA GGATTTATTC TACAACTTGT AAAGTTAACA AGCTTTATTA TCGCATACCT TGTTGCATAC TGGTACTGTA AAGATTTAGC GCCAGCGTTG GCGAAAATGA TTCCGTATCC GTTTGATAAA AATGTATCCG TTCCAGAATG GATTGATGCA AACAATATTG AGGCAGTATT TTATCAAGCA ATTGCGTTTA TTATACTGTT TATTGTTACA AAGATTGCAC TTTCCTTACT TGGTAATTTG TTAAATATGT TTGCGGAAAT ACCAGTGTTA AAGCAAATTA ATGCATTTGC TGGAGCAATT CTTGGTTTTT TAGAAGTATA CATTATTTTG TTTGTTTTAA TTATTATTGG CACGATTCTT CCGATTGAAC AAGTGCAAAC ACCATTACAA AAATCATCAA TTAGCAAAAT AATTGTAGAC GATACACCGA TTCTTTCTGA AAAGGTGAAG GAACTATGGC AGACAGGTAG CAGAGTATAA
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Protein sequence | MIDIIIILLL VMGFFLGLRR GFILQLVKLT SFIIAYLVAY WYCKDLAPAL AKMIPYPFDK NVSVPEWIDA NNIEAVFYQA IAFIILFIVT KIALSLLGNL LNMFAEIPVL KQINAFAGAI LGFLEVYIIL FVLIIIGTIL PIEQVQTPLQ KSSISKIIVD DTPILSEKVK ELWQTGSRV
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